RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 EXOSC4Q9NPD3 245 aaKnown RBP16.84■□□□□ 0.29
CCDC43-201ENST00000315286 CMC2Q9NRP2 79 aa16.84■□□□□ 0.29
CCDC43-201ENST00000315286 MRTO4Q9UKD2 239 aaKnown RBP16.84■□□□□ 0.29
CCDC43-201ENST00000315286 FAM86C2PA6NEL3 165 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 REM1O75628 298 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 PPP1R3DO95685 299 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 PSMA1P25786 263 aaKnown RBP16.83■□□□□ 0.28
CCDC43-201ENST00000315286 SLC1A3P43003 542 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 DCAF7P61962 342 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCDC43-201ENST00000315286 SKP2Q13309 424 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 HLA-DQA1Q5Y7H0 255 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 LRRC17Q8N6Y2 441 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 PTP4A1Q93096 173 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 CDADC1Q9BWV3 514 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 COPS7AQ9UBW8 275 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 SEC14L4Q9UDX3 406 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 ICAM5Q9UMF0 924 aa16.83■□□□□ 0.28
CCDC43-201ENST00000315286 SPIN1Q9Y657 262 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-201ENST00000315286 ZC3H12DA2A288 527 aaKnown RBP16.82■□□□□ 0.28
CCDC43-201ENST00000315286 LRRN3E7EW58 273 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 GTPBP1O00178 669 aaKnown RBP16.82■□□□□ 0.28
CCDC43-201ENST00000315286 ICOSLGO75144 302 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 BMP4P12644 408 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 CPEP16870 476 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 ATP6V1E1P36543 226 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 PWWP2BQ6NUJ5 590 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 NIPAL3Q6P499 406 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 MEPCEQ7L2J0 689 aaKnown RBP16.82■□□□□ 0.28
CCDC43-201ENST00000315286 IGFN1Q86VF2 1251 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 GID4Q8IVV7 300 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 OIT3Q8WWZ8 545 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 S100ZQ8WXG8 99 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 TRMT61AQ96FX7 289 aaKnown RBP16.82■□□□□ 0.28
CCDC43-201ENST00000315286 CCDC74BQ96LY2 380 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF649Q9BS31 505 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 RTN4RQ9BZR6 473 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 TGIF2Q9GZN2 237 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 WWTR1Q9GZV5 400 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 MMP27Q9H306 513 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 IGHV3-20A0A0C4DH32 117 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF264O43296 627 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 CCR4P51679 360 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 PRPF38BQ5VTL8 546 aaKnown RBP16.82■□□□□ 0.28
CCDC43-201ENST00000315286 PEAR1Q5VY43 1037 aaPredicted RBP16.82■□□□□ 0.28
CCDC43-201ENST00000315286 MFSD4AQ8N468 514 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 SIRT6Q8N6T7 355 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 SLC37A3Q8NCC5 494 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF485Q8NCK3 441 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 FNDC8Q8TC99 324 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 ZNF524Q96C55 264 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 SGTBQ96EQ0 304 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 PALMDQ9NP74 551 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 STUB1Q9UNE7 303 aa16.82■□□□□ 0.28
CCDC43-201ENST00000315286 SCRG1O75711 98 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 IGHA1P01876 353 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 SLC9A3P48764 834 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 ITGADQ13349 1161 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 NKAIN1Q4KMZ8 207 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 WBP2NLQ6ICG8 309 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 GDPGP1Q6ZNW5 385 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 SLC29A4Q7RTT9 530 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 OR51G2Q8NGK0 314 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 OR9Q1Q8NGQ5 310 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 SECISBP2Q96T21 854 aaKnown RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 KLHDC3Q9BQ90 382 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 MESP1Q9BRJ9 268 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 ARHGAP9Q9BRR9 750 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 WDR12Q9GZL7 423 aaKnown RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 NXF2Q9GZY0 626 aaKnown RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 EXOSC3Q9NQT5 275 aaKnown RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 CCDC59Q9P031 241 aaKnown RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 TNFRSF10DQ9UBN6 386 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 RARRES3Q9UL19 164 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 IGLV3-12A0A075B6K2 115 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 PNMA8CA0A1B0GUJ8 204 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 PRR23D1E9PI22 279 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 J3QRE1 110 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 TO15178 435 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 TSPAN2O60636 221 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 TSPAN19P0C672 248 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 PRR23D2P0DMB1 279 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-201ENST00000315286 PEPDP12955 493 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 IL12BP29460 328 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 NOS3P29474 1203 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 SLC6A6P31641 620 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 INAQ16352 499 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 KLHL12Q53G59 568 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 NAT6Q93015 286 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 ERVK13-1Q9NX77 482 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 BAIAP2Q9UQB8 552 aa16.81■□□□□ 0.28
CCDC43-201ENST00000315286 IGKV1D-42A0A075B6H8 117 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 RIIAD1A6NNX1 92 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 YKT6O15498 198 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 CRMP1Q14194 572 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 CYB561A3Q8NBI2 242 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 PSD4Q8NDX1 1056 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 OR5M3Q8NGP4 307 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 IFI44Q8TCB0 444 aa16.8■□□□□ 0.28
CCDC43-201ENST00000315286 KISS1RQ969F8 398 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms