RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 MT-CO3P00414 261 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 IGF2P01344 180 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 JMJD7P0C870 316 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 DBTP11182 482 aaKnown RBP15.29■□□□□ 0.04
CLCF1-201ENST00000312438 ITPKBP27987 946 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 SH3BGRP55822 239 aaPredicted RBP15.29■□□□□ 0.04
CLCF1-201ENST00000312438 ZNF91Q05481 1191 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 IRF3Q14653 427 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 TMEM44Q2T9K0 475 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 FAM69BQ5VUD6 431 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 C6orf15Q6UXA7 325 aaPredicted RBP15.29■□□□□ 0.04
CLCF1-201ENST00000312438 NUP54Q7Z3B4 507 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 LNX2Q8N448 690 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 ANKK1Q8NFD2 765 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 OR51A7Q8NH64 312 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 OR5W2Q8NH69 310 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 ELP5Q8TE02 316 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 TTC9Q92623 222 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 TMEM80Q96HE8 168 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 SH3YL1Q96HL8 342 aaPredicted RBP15.29■□□□□ 0.04
CLCF1-201ENST00000312438 TNFRSF13CQ96RJ3 184 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 MYCBPQ99417 103 aaPredicted RBP15.29■□□□□ 0.04
CLCF1-201ENST00000312438 TMEM43Q9BTV4 400 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 DEFB126Q9BYW3 111 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 ADAM19Q9H013 955 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 ZNF700Q9H0M5 742 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 PISDQ9UG56 409 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 GPR52Q9Y2T5 361 aa15.29■□□□□ 0.04
CLCF1-201ENST00000312438 GPR179Q6PRD1 2367 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 IGHV1-45A0A0A0MS14 117 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 VGLL3A8MV65 326 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 BHLHE40O14503 412 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 PRODHO43272 600 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 CSO75390 466 aaKnown RBP15.28■□□□□ 0.04
CLCF1-201ENST00000312438 IGHEP01854 428 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 PGCP20142 388 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 PSMB9P28065 219 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 GRK5P34947 590 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 FOLR3P41439 243 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 P2RX1P51575 399 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 EXT1Q16394 746 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 CSRP2Q16527 193 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 BTBD16Q32M84 506 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 KLHL22Q53GT1 634 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 ERI1Q8IV48 349 aaKnown RBP15.28■□□□□ 0.04
CLCF1-201ENST00000312438 RAB2BQ8WUD1 216 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 FUNDC2Q9BWH2 189 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 ENKD1Q9H0I2 346 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 MRPS18AQ9NVS2 196 aaKnown RBP15.28■□□□□ 0.04
CLCF1-201ENST00000312438 BAIAP2Q9UQB8 552 aa15.28■□□□□ 0.04
CLCF1-201ENST00000312438 TRAV27A0A087WT01 109 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 KDM4EB2RXH2 506 aaPredicted RBP15.27■□□□□ 0.04
CLCF1-201ENST00000312438 SCO2O43819 266 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 MAN1A2O60476 641 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 ZNF354AO60765 605 aaPredicted RBP15.27■□□□□ 0.04
CLCF1-201ENST00000312438 LCKP06239 509 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 SLC9A3P48764 834 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 TMED10P49755 219 aaKnown RBP15.27■□□□□ 0.04
CLCF1-201ENST00000312438 FBXW4P57775 412 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 EIF3IQ13347 325 aaKnown RBP15.27■□□□□ 0.04
CLCF1-201ENST00000312438 CBFBQ13951 182 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 ANKRD13BQ86YJ7 626 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 SLC15A4Q8N697 577 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 SLC22A8Q8TCC7 542 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 DUSP19Q8WTR2 217 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 HGDQ93099 445 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 RFKQ969G6 155 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 IMMP1LQ96LU5 166 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 DEPDC7Q96QD5 511 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 IFT27Q9BW83 186 aa15.27■□□□□ 0.04
CLCF1-201ENST00000312438 NAA50Q9GZZ1 169 aaKnown RBP15.27■□□□□ 0.04
CLCF1-201ENST00000312438 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.27■□□□□ 0.043e-6■■■■□ 25.5
CLCF1-201ENST00000312438 TTC28Q96AY4 2481 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.27■□□□□ 0.03
CLCF1-201ENST00000312438 IRGMA1A4Y4 181 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 H3BMQ9 156 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 PLD2O14939 933 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 PAX7P23759 505 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 MST1P26927 711 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 TACR3P29371 465 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 MLLT10P55197 1068 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 AADACL4Q5VUY2 407 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 RNLSQ5VYX0 342 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 THSD4Q6ZMP0 1018 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 OR5M3Q8NGP4 307 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 B4GALNT2Q8NHY0 566 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 M1APQ8TC57 530 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 COG8Q96MW5 612 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 FN3KQ9H479 309 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 H2AFY2Q9P0M6 372 aaPredicted RBP15.27■□□□□ 0.03
CLCF1-201ENST00000312438 PCDHGA3Q9Y5H0 932 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 HS3ST3B1Q9Y662 390 aa15.27■□□□□ 0.03
CLCF1-201ENST00000312438 IGKV1D-42A0A075B6H8 117 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 LRP3O75074 770 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 NUDT14O95848 222 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 DLGAP3O95886 979 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 COX6A1P12074 109 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 TCN2P20062 427 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 SLC6A6P31641 620 aa15.26■□□□□ 0.03
CLCF1-201ENST00000312438 FOXK2Q01167 660 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms