RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 LINC01387J3KSC0 135 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 TPOP07202 933 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 CCNA2P20248 432 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 GNLYP22749 145 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 ELK4P28324 431 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 SHC1P29353 583 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
APTX-201ENST00000309615 CLDN18P56856 261 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 SRYQ05066 204 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 OR1Q1Q15612 314 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 GXYLT1Q4G148 440 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 IFI44LQ53G44 452 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 ENTPD8Q5MY95 495 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 DEF8Q6ZN54 512 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 CD163Q86VB7 1156 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 UBQLNLQ8IYU4 475 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 LILRA2Q8N149 483 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 ATP6V1C2Q8NEY4 427 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 FAM57AQ8TBR7 257 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 GEMIN6Q8WXD5 167 aaKnown RBP11.62□□□□□ -0.55
APTX-201ENST00000309615 C3orf49Q96BT1 292 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 WDYHV1Q96HA8 205 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 TRIM2Q9C040 744 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 AMBRA1Q9C0C7 1298 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 POMPQ9Y244 141 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 AP4B1Q9Y6B7 739 aa11.62□□□□□ -0.55
APTX-201ENST00000309615 TMED7-TICAM2A0A0A6YYA0 188 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 TCRBV5S2A0A599 114 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 CPSF4LA6NMK7 179 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 BCKDKO14874 412 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 SEC14L5O43304 696 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 FMO6PO60774 539 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 ZNF708P17019 499 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 SFTPDP35247 375 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 HTR3AP46098 478 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 SUCLG1P53597 346 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 CLDN15P56746 228 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 RAC1P63000 192 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 RBPJQ06330 500 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 TRAP1Q12931 704 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 SELENBP1Q13228 472 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 WLSQ5T9L3 541 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 GGNQ86UU5 652 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 ATCAYQ86WG3 371 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 ADAMTS16Q8TE57 1224 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 PHF10Q8WUB8 498 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 PYURFQ96I23 114 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 PRDM14Q9GZV8 571 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 MMADHCQ9H3L0 296 aaPredicted RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 TMEM27Q9HBJ8 222 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 ALKBH4Q9NXW9 302 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 RPS6KB2Q9UBS0 482 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 CHRNA9Q9UGM1 479 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 TINAGQ9UJW2 476 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 CAMK2AQ9UQM7 478 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 OSGIN2Q9Y236 505 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 TMED7Q9Y3B3 224 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 A0A0B4J2E0 115 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 A0A1B0GX12 115 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 IFNW1P05000 195 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 CPN1P15169 458 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 CDH12P55289 794 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 KCNC4Q03721 635 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 FLOT2Q14254 428 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 BCL2A1Q16548 175 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 EIF2S3LQ2VIR3 472 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 ALG10BQ5I7T1 473 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 C3orf33Q6P1S2 294 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 C3P1Q6ZMU1 363 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 Q6ZPB1 254 aaPredicted RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 YTHDF3Q7Z739 585 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 ATG4DQ86TL0 474 aaPredicted RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 UTP4Q969X6 686 aaKnown RBP11.61□□□□□ -0.55
APTX-201ENST00000309615 SERINC1Q9NRX5 453 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 SH3BGRL2Q9UJC5 107 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 PRDM4Q9UKN5 801 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 NBASA2RRP1 2371 aa11.61□□□□□ -0.55
APTX-201ENST00000309615 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 J3KTA2 159 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 PRRG2O14669 202 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 STAMBPO95630 424 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 THY1P04216 161 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 CXCR1P25024 350 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 YAP1P46937 504 aaKnown RBP11.6□□□□□ -0.55
APTX-201ENST00000309615 PIN1Q13526 163 aaPredicted RBP11.6□□□□□ -0.55
APTX-201ENST00000309615 ZSCAN26Q16670 478 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.6□□□□□ -0.55
APTX-201ENST00000309615 CTU2Q2VPK5 515 aaKnown RBP11.6□□□□□ -0.55
APTX-201ENST00000309615 TMEM176BQ3YBM2 270 aaPredicted RBP11.6□□□□□ -0.55
APTX-201ENST00000309615 MTX3Q5HYI7 312 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 ZNF585AQ6P3V2 769 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 ZNF613Q6PF04 617 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 ULK3Q6PHR2 472 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 TSEN54Q7Z6J9 526 aaKnown RBP11.6□□□□□ -0.55
APTX-201ENST00000309615 DNAJA4Q8WW22 397 aaPredicted RBP11.6□□□□□ -0.55
APTX-201ENST00000309615 C7orf34Q96L11 122 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
APTX-201ENST00000309615 OR11A1Q9GZK7 315 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms