RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ZNF304Q9HCX3 659 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SMCO4Q9NRQ5 59 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HAO2Q9NYQ3 351 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RIMS3Q9UJD0 308 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CABIN1Q9Y6J0 2220 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 BCAS1O75363 584 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 CA11O75493 328 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR7A10O76100 309 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PRKCGP05129 697 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 KIR2DS2P43631 304 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR8S1Q8NH09 359 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 FNDC9Q8TBE3 224 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR51B5Q9H339 312 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 STRAPQ9Y3F4 350 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 NPIPB15A6NHN6 443 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 LRRC30A6NM36 301 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 IDUAP35475 653 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PRKAG1P54619 331 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RPS15P62841 145 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 NKX6-1P78426 367 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 FOXK1P85037 733 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 DSC2Q02487 901 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RD3Q7Z3Z2 195 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 GRINAQ7Z429 371 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR51L1Q8NGJ5 315 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR51A4Q8NGJ6 313 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ST8SIA1Q92185 356 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZBTB8AQ96BR9 441 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SAT2Q96F10 170 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 FUZQ9BT04 418 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 KCNJ16Q9NPI9 418 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MRPL22Q9NWU5 206 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 EIF2B4Q9UI10 523 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 RAB22AQ9UL26 194 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZNF749O43361 778 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 USP12O75317 370 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SLC16A8O95907 504 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RPS23P62266 143 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 FAM209BQ5JX69 171 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ALKAL1Q6UXT8 129 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 FAM26EQ8N5C1 309 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR5H2Q8NGV7 314 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 COQ10AQ96MF6 247 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 B3GNT4Q9C0J1 378 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CHST6Q9GZX3 395 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LIN7BQ9HAP6 207 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LYRM2Q9NU23 88 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 PLEKHJ1Q9NW61 149 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HNRNPA2B1P22626 353 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 APOBEC1P41238 236 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 F2RL1P55085 397 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RBPJQ06330 500 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ACSM1Q08AH1 577 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZNF345Q14585 488 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MBOAT2Q6ZWT7 520 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR2L8Q8NGY9 312 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 GSX2Q9BZM3 304 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MCOLN1Q9GZU1 580 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 COMMD3Q9UBI1 195 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 U3KQV3 271 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MTMR11A4FU01 709 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TFP02787 698 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TYRP1P17643 537 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PRAMEF20Q5VT98 475 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LILRB1Q8NHL6 650 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 GAB3Q8WWW8 586 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ABHD14BQ96IU4 210 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PKP2Q99959 881 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SLC6A17Q9H1V8 727 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SDC3O75056 442 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 RPS2P15880 293 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 SMPD1P17405 629 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 NTSR1P30989 418 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SLC35A1P78382 337 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 PDE7AQ13946 482 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TATDN3Q17R31 274 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SULF2Q8IWU5 870 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 JAGN1Q8N5M9 183 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TM6SF2Q9BZW4 377 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CREBZFQ9NS37 354 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 GNG8Q9UK08 70 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CACNG2Q9Y698 323 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 TNFSF9P41273 254 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LMAN2Q12907 356 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SMAD1Q15797 465 aaKnown RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 CCSMST1Q4G0I0 132 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 SBSNQ6UWP8 590 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 IL34Q6ZMJ4 242 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LYSMD2Q8IV50 215 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ZNF433Q8N7K0 673 aaPredicted RBP3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR13C3Q8NGS6 347 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 KLHDC7BQ96G42 594 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 INTS14Q96SY0 518 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ARL5AQ9Y689 179 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 CD1AP06126 327 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ABCG1P45844 678 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 LANCL3Q6ZV70 420 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 OR13F1Q8NGS4 319 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 FGF14Q92915 247 aa3.76□□□□□ -1.81
USH2A-201ENST00000307340 ECHDC3Q96DC8 303 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms