RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 DUSP11O75319 330 aaKnown RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 DLX5P56178 289 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 PIGCQ92535 297 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF586Q9NXT0 402 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 NCOR1O75376 2440 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TBPP20226 339 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 MEOX1P50221 254 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TMEM115Q12893 351 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 RTL6Q6ICC9 239 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 VWA1Q6PCB0 445 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF417Q8TAU3 575 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 GAR1Q9NY12 217 aaKnown RBP12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SLC6A14Q9UN76 642 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 MYF6P23409 242 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 DHRS11Q6UWP2 260 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 SUMF1Q8NBK3 374 aa12.62□□□□□ -0.39
TRIM56-201ENST00000306085 TNFRSF10AO00220 468 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 MRPL19P49406 292 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SLC29A1Q99808 456 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 BCO2Q9BYV7 579 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ARNT2Q9HBZ2 717 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 TCRBV21S2A2A0A5A6 115 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ICMTO60725 284 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ELLP55199 621 aaPredicted RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SCLYQ96I15 445 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ZNF587Q96SQ5 575 aaPredicted RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CSN1S1P47710 185 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 KCNC3Q14003 757 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 C9orf152Q5JTZ5 239 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 C19orf35Q6ZS72 473 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 NCR1O76036 304 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 FBXL22Q6P050 247 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 NAT8LQ8N9F0 302 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 GPR22Q99680 433 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 FBXL2Q9UKC9 423 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CNR1P21554 472 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 COQ4Q9Y3A0 265 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 YIPF1Q9Y548 306 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 OR6C76A6NM76 312 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 LATO43561 262 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 RAC1P63000 192 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SHC2P98077 582 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 PCK2Q16822 640 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 MPEG1Q2M385 716 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 LARP4Q71RC2 724 aaKnown RBP eCLIP12.61□□□□□ -0.391e-6■□□□□ 8.9
TRIM56-201ENST00000306085 ZDHHC14Q8IZN3 488 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 OR9Q2Q8NGE9 314 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SFXN2Q96NB2 322 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ALG12Q9BV10 488 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CHRNA9Q9UGM1 479 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 GGT1P19440 569 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 GPM6BQ13491 265 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CPOQ8IVL8 374 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 C4orf36Q96KX1 117 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 ACRP10323 421 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 LTBQ06643 244 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 SNTB1Q13884 538 aaKnown RBP12.61□□□□□ -0.39
TRIM56-201ENST00000306085 GRM7Q14831 915 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 AKR1E2Q96JD6 320 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CHRDQ9H2X0 955 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 FBXO8Q9NRD0 319 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 HSFX1Q9UBD0 423 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 RASD1Q9Y272 281 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 CSNK1G3Q9Y6M4 447 aa12.61□□□□□ -0.39
TRIM56-201ENST00000306085 RAP2BP61225 183 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 MRPS10P82664 201 aaKnown RBP12.6□□□□□ -0.39
TRIM56-201ENST00000306085 IKZF1Q13422 519 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 KIAA0141Q14154 515 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-201ENST00000306085 ABHD17BQ5VST6 288 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 DNAJC5GQ8N7S2 189 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 NSUN5Q96P11 429 aaKnown RBP12.6□□□□□ -0.39
TRIM56-201ENST00000306085 OR7D2Q96RA2 312 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 TRAPPC2LQ9UL33 140 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 HPNP05981 417 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 MTHFD2P13995 350 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 ETV3P41162 512 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 RPS21P63220 83 aaKnown RBP12.6□□□□□ -0.39
TRIM56-201ENST00000306085 NLRC3Q7RTR2 1065 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 C2CD4AQ8NCU7 369 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-201ENST00000306085 FGFBP2Q9BYJ0 223 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 GALNT9Q9HCQ5 603 aa12.6□□□□□ -0.39
TRIM56-201ENST00000306085 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms