RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CPEB2Q7Z5Q1 589 aaKnown RBP11□□□□□ -0.65
TPM3-202ENST00000302206 GALNT15Q8N3T1 639 aa11□□□□□ -0.65
TPM3-202ENST00000302206 APCDD1LQ8NCL9 501 aa11□□□□□ -0.65
TPM3-202ENST00000302206 OR52L1Q8NGH7 329 aa11□□□□□ -0.65
TPM3-202ENST00000302206 OR4Q3Q8NH05 313 aa11□□□□□ -0.65
TPM3-202ENST00000302206 PFN4Q8NHR9 129 aa11□□□□□ -0.65
TPM3-202ENST00000302206 PHOSPHO1Q8TCT1 267 aa11□□□□□ -0.65
TPM3-202ENST00000302206 GRHL3Q8TE85 626 aa11□□□□□ -0.65
TPM3-202ENST00000302206 RFKQ969G6 155 aa11□□□□□ -0.65
TPM3-202ENST00000302206 OMA1Q96E52 524 aa11□□□□□ -0.65
TPM3-202ENST00000302206 TMEM80Q96HE8 168 aa11□□□□□ -0.65
TPM3-202ENST00000302206 ZNF582Q96NG8 517 aaPredicted RBP11□□□□□ -0.65
TPM3-202ENST00000302206 ADOQ96SZ5 270 aa11□□□□□ -0.65
TPM3-202ENST00000302206 LPAR4Q99677 370 aa11□□□□□ -0.65
TPM3-202ENST00000302206 EDEM2Q9BV94 578 aa11□□□□□ -0.65
TPM3-202ENST00000302206 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
TPM3-202ENST00000302206 FUNDC2Q9BWH2 189 aa11□□□□□ -0.65
TPM3-202ENST00000302206 FN3KQ9H479 309 aa11□□□□□ -0.65
TPM3-202ENST00000302206 AMBNQ9NP70 447 aa11□□□□□ -0.65
TPM3-202ENST00000302206 MEPEQ9NQ76 525 aaPredicted RBP11□□□□□ -0.65
TPM3-202ENST00000302206 DNAJC27Q9NZQ0 273 aa11□□□□□ -0.65
TPM3-202ENST00000302206 WARS2Q9UGM6 360 aaKnown RBP11□□□□□ -0.65
TPM3-202ENST00000302206 GPN3Q9UHW5 284 aaPredicted RBP11□□□□□ -0.65
TPM3-202ENST00000302206 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 LOC102723996A0A087X1L8 192 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 LNP1A1A4G5 178 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 M0R3G1 203 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 FADS1O60427 444 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 ICOSLGO75144 302 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 GABARAPO95166 117 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 KLK3P07288 261 aaPredicted RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 CD63P08962 238 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 BMP7P18075 431 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 CCNA2P20248 432 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 C21orf33P30042 268 aaPredicted RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 SLC9A3P48764 834 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 E2F1Q01094 437 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 TMED1Q13445 227 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 CD226Q15762 336 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 PAPD4Q6PIY7 484 aaKnown RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 SMARCD3Q6STE5 483 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 APOOLQ6UXV4 268 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 CCDC81Q6ZN84 652 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 SHISA6Q6ZSJ9 500 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 MEX3DQ86XN8 651 aaKnown RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 MISPQ8IVT2 679 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 CADM2Q8N3J6 435 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 LNX2Q8N448 690 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 OR5L2Q8NGL0 311 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 RNF217Q8TC41 542 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 FANK1Q8TC84 345 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 C3orf49Q96BT1 292 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 LRR1Q96L50 414 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 SAMD8Q96LT4 415 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 CTRCQ99895 268 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 WDR77Q9BQA1 342 aaPredicted RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 TMEM43Q9BTV4 400 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 CRB3Q9BUF7 120 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 DPH1Q9BZG8 443 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 UBQLN3Q9H347 655 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 HHATLQ9HCP6 504 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 FGF20Q9NP95 211 aaPredicted RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 C20orf141Q9NUB4 165 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM3-202ENST00000302206 WASF3Q9UPY6 502 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 SIGLEC7Q9Y286 467 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 PCDHGB6Q9Y5F9 930 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 AKAP13Q12802 2813 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
TPM3-202ENST00000302206 COL27A1Q8IZC6 1860 aaPredicted RBP10.99□□□□□ -0.65
TPM3-202ENST00000302206 DMXL2Q8TDJ6 3036 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 FREM2Q5SZK8 3169 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 C4orf47A7E2U8 309 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 C9J4A7 227 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 BHLHE40O14503 412 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 ATE1O95260 518 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 LCKP06239 509 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 ADORA3P0DMS8 318 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 CEACAM1P13688 526 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 CD59P13987 128 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 PSMB9P28065 219 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 PCSK6P29122 969 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 FXYD6P3P58550 94 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 SLC26A5P58743 744 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 RAB15P59190 212 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 RAB40BQ12829 278 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 NDUFAF6Q330K2 333 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 AADACL4Q5VUY2 407 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 FAAH2Q6GMR7 532 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 SLC30A6Q6NXT4 461 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 ZNF517Q6ZMY9 492 aaPredicted RBP10.98□□□□□ -0.65
TPM3-202ENST00000302206 SLC16A12Q6ZSM3 486 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 ATG4DQ86TL0 474 aaPredicted RBP10.98□□□□□ -0.65
TPM3-202ENST00000302206 LIPHQ8WWY8 451 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 SGTBQ96EQ0 304 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 CMKLR1Q99788 373 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 ZPBPQ9BS86 351 aa10.98□□□□□ -0.65
TPM3-202ENST00000302206 STRADBQ9C0K7 418 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms