RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 UCHL1P09936 223 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 SBK2P0C263 348 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 VSIG10L2P0DP72 767 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF35P13682 527 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 TYRP14679 529 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 NT5EP21589 574 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 PSMB5P28074 263 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 FGL2Q14314 439 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 MLC1Q15049 377 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 DCAF12L2Q5VW00 463 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 C18orf63Q68DL7 685 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ZC3H14Q6PJT7 736 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 C11orf96Q7Z7L8 435 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 TRAPPC5Q8IUR0 188 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 OR2A12Q8NGT7 310 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 PNPLA2Q96AD5 504 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 GIMAP5Q96F15 307 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 GFI1Q99684 422 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 VN1R3Q9BXE9 311 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 EQTNQ9NQ60 294 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 GABARAPH6UMI1 98 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 PQBP1O60828 265 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 KHDRBS3O75525 346 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 KRT33AO76009 404 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 MAT2AP31153 395 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 TAS2R38P59533 333 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 TAS2R43P59537 309 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 RPS11P62280 158 aaKnown RBP eCLIP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 RPS15P62841 145 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 POLR2LP62875 67 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 FGL1Q08830 312 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ELAVL2Q12926 359 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 AGERQ15109 404 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 RPE65Q16518 533 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 FAM74A1Q5RGS3 127 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 HES5Q5TA89 166 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 OLFML2AQ68BL7 652 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 THSD4Q6ZMP0 1018 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 GJD3Q8N144 294 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 FANK1Q8TC84 345 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 TEAD3Q99594 435 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 MCHR1Q99705 422 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 RHBGQ9H310 441 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 SLC35C2Q9NQQ7 365 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 SLC7A7Q9UM01 511 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 SLC6A5Q9Y345 797 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 CHD7Q9P2D1 2997 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ANKRD20A5PA0PJZ0 165 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 PYCARD-AS1I3L0S3 204 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 NDUFS4O43181 175 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ERAL1O75616 437 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 STATHP02808 62 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 GYPBP06028 91 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ADH7P40394 386 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 PTH2RP49190 550 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 HOXA1P49639 335 aaPredicted RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 HCCSP53701 268 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 CLDN12P56749 244 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 CLDN2P57739 230 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 TP53I3Q53FA7 332 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 LHX8Q68G74 356 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 CYB561A3Q8NBI2 242 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 KCT2Q8NC54 265 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 BRIX1Q8TDN6 353 aaKnown RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 SLC25A28Q96A46 364 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF764Q96H86 408 aaPredicted RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 DEFB118Q96PH6 123 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
ZNF558-201ENST00000301475 AICDAQ9GZX7 198 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 FN3KQ9H479 309 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 C20orf141Q9NUB4 165 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 ACTR10Q9NZ32 417 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 MED11Q9P086 117 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 KLHL9Q9P2J3 617 aa10.07□□□□□ -0.8
ZNF558-201ENST00000301475 CEP290O15078 2479 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 NAP1L6A6NFF2 107 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 SNRPGP15A8MWD9 76 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 FCMRO60667 390 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 STX11O75558 287 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 LEFTY1O75610 366 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 OLFM2O95897 454 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 ECDO95905 644 aaPredicted RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 PRG2P13727 222 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 MAKP20794 623 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 MPGP29372 298 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 GPR85P60893 370 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 HFEQ30201 348 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 LCTLQ6UWM7 567 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 WDR88Q6ZMY6 472 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 ZNF793Q6ZN11 406 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 OR5AR1Q8NGP9 310 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 OR7D2Q96RA2 312 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 UTP23Q9BRU9 249 aaKnown RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 SEMA4CQ9C0C4 833 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 SLC25A18Q9H1K4 315 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 BARX1Q9HBU1 254 aaPredicted RBP10.06□□□□□ -0.8
ZNF558-201ENST00000301475 INPP5EQ9NRR6 644 aa10.06□□□□□ -0.8
ZNF558-201ENST00000301475 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms