RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TSFMP43897 325 aaKnown RBP22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 LSSP48449 732 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 PPP1CAP62136 330 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 EIPR1Q53HC9 387 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF776Q68DI1 518 aaPredicted RBP22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 ACOT12Q8WYK0 555 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 AHCYL2Q96HN2 611 aaKnown RBP22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 NKIRAS2Q9NYR9 191 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 C19orf53Q9UNZ5 99 aaPredicted RBP22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 A0A087WV48 116 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 SOX30O94993 753 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 DBIP07108 87 aaKnown RBP22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 DRD5P21918 477 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 GRPRP30550 384 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 SIAH3Q8IW03 269 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 OR6C4Q8NGE1 309 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 OR8H1Q8NGG4 311 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 FGF14Q92915 247 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 PDCD1LG2Q9BQ51 273 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 GPR174Q9BXC1 333 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 NIPAL2Q9H841 368 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 BRD7Q9NPI1 651 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 ADAM18Q9Y3Q7 739 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 SLC22A7Q9Y694 548 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 SLC22A31A6NKX4 558 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 FAM171A2A8MVW0 826 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 CDC123O75794 336 aaPredicted RBP22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 RCBTB2O95199 551 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 MT-ND4P03905 459 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 POU3F3P20264 500 aaPredicted RBP22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 NPR2P20594 1047 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 CRYZQ08257 329 aaKnown RBP22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 GPM6BQ13491 265 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 SLC36A2Q495M3 483 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 GARNL3Q5VVW2 1013 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 TIGD3Q6B0B8 471 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 FIGLAQ6QHK4 219 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 PLCZ1Q86YW0 608 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 FAM3CQ92520 227 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 SERINC2Q96SA4 455 aa22.52■■□□□ 1.2
SPTSSA-201ENST00000298130 IDSB3KWA1 339 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 H0YGG7 62 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 PLPP2O43688 288 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 TFP02787 698 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 ADRB1P08588 477 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 ANKRD34CP0C6C1 535 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 PEPDP12955 493 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 ARF3P61204 181 aaPredicted RBP22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 DEFB110Q30KQ9 67 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 FHL5Q5TD97 284 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 PARM1Q6UWI2 310 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 USP53Q70EK8 1073 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 FLVCR1-AS1Q8TAF5 88 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 ERMAPQ96PL5 475 aaPredicted RBP22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 EVA1BQ9NVM1 165 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 PHF11Q9UIL8 331 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 C4orf47A7E2U8 309 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 COL9A1P20849 921 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 FAM98AQ8NCA5 519 aaKnown RBP22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 OR11H4Q8NGC9 324 aa22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF346Q9UL40 294 aaKnown RBP22.51■■□□□ 1.19
SPTSSA-201ENST00000298130 A0A1B0GWA3 101 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 RAB3BP20337 219 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 UQCRC1P31930 480 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 ARFIP1P53367 373 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 FAM53BQ14153 422 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 GPR18Q14330 331 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF542PQ5EBM4 170 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 OR14A2Q96R54 314 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 UBL7Q96S82 380 aaPredicted RBP22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 AUNIPQ9H7T9 357 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 MGAT4AQ9UM21 535 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 SLC35A3Q9Y2D2 325 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 HRKO00198 91 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 TMEM196Q5HYL7 178 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 C9orf62Q8N4C0 152 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF655Q8N720 491 aaPredicted RBP22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 GTPBP2Q9BX10 602 aaKnown RBP22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 JAM3Q9BX67 310 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 UCKL1Q9NWZ5 548 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 NTMQ9P121 344 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 H3BSH0 61 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 K7EQS6 105 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 TNFRSF10AO00220 468 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 AGR2O95994 175 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 THBS1P07996 1170 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 HIST1H1CP16403 213 aaKnown RBP22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 PTBP1P26599 531 aaKnown RBP eCLIP22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 RBMS1P29558 406 aaKnown RBP22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 BDH1Q02338 343 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 CEP78Q5JTW2 689 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 TOMM5Q8N4H5 51 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 PIGKQ92643 395 aa22.5■■□□□ 1.19
SPTSSA-201ENST00000298130 PLRG1O43660 514 aaKnown RBP22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 ZNF3P17036 446 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 LIX1LQ8IVB5 337 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 SERPINA12Q8IW75 414 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 THAP4Q8WY91 577 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 DERL3Q96Q80 235 aa22.49■■□□□ 1.19
SPTSSA-201ENST00000298130 TMEM27Q9HBJ8 222 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms