RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 HAVCR2Q8TDQ0 301 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 MCHR1Q99705 422 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 TWSG1Q9GZX9 223 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 SLC6A20Q9NP91 592 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 PCDHB16Q9NRJ7 776 aa9.62□□□□□ -0.87
SKA1-201ENST00000285116 H2AFY2Q9P0M6 372 aaPredicted RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
SKA1-201ENST00000285116 TRAV1-2A0A0B4J238 106 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 DVL2O14641 736 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 PRAF2O60831 178 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 PEX14O75381 377 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 UBL3O95164 117 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 LYPD3O95274 346 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 SERPIND1P05546 499 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ZGLP1P0C6A0 271 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 IGFBP4P22692 258 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 CBX5P45973 191 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ZNF136P52737 540 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ZNF425Q6IV72 752 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 MFSD12Q6NUT3 480 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 NRMQ8IXM6 262 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 BBS1Q8NFJ9 593 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 MOSPD2Q8NHP6 518 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 C10orf90Q96M02 699 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 LRFN5Q96NI6 719 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 DDOQ99489 341 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ALG8Q9BVK2 526 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 UNC119BA6NIH7 251 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 SLC22A31A6NKX4 558 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 L7N2F9 121 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 CTDSPLO15194 276 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ERI3O43414 337 aaKnown RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 GSTZ1O43708 216 aaPredicted RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 TGM6O95932 706 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 HPXP02790 462 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 NMBP08949 121 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 TBXA2RP21731 343 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ATP6V1E1P36543 226 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 DYRK1AQ13627 763 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ZSWIM7Q19AV6 140 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 CLEC12AQ5QGZ9 265 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 OLIG3Q7RTU3 272 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 SZRD1Q7Z422 152 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 CPOQ8IVL8 374 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 CCDC116Q8IYX3 515 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 OR2L13Q8N349 312 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 ZNF527Q8NB42 609 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 NT5CQ8TCD5 201 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 SIPA1Q96FS4 1042 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 SLC35A4Q96G79 324 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 CXorf58Q96LI9 332 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 LRRC3BQ96PB8 259 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 INSM2Q96T92 566 aaPredicted RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 MS4A7Q9GZW8 240 aaPredicted RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 MCCC2Q9HCC0 563 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 MRPS30Q9NP92 439 aaKnown RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 CMC2Q9NRP2 79 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 RPS6KB2Q9UBS0 482 aa9.61□□□□□ -0.87
SKA1-201ENST00000285116 YBX2Q9Y2T7 364 aaKnown RBP9.61□□□□□ -0.87
SKA1-201ENST00000285116 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PLSCR5A0PG75 271 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PPM1DO15297 605 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ITGA10O75578 1167 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 MT-ND5P03915 603 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 GUSBP08236 651 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 FGF2P09038 288 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SLC2A5P22732 501 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SHC1P29353 583 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 MC3RP41968 323 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 GCGRP47871 477 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PRKAG1P54619 331 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 STXBP1P61764 594 aaKnown RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 RPS7P62081 194 aaKnown RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 FOXK2Q01167 660 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SNTB2Q13425 540 aaKnown RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 ZNF234Q14588 700 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 TCEAL5Q5H9L2 206 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PRPF38BQ5VTL8 546 aaKnown RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 LRFN4Q6PJG9 635 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 TMPRSS11FQ6ZWK6 438 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ELMOD3Q96FG2 381 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 LCORQ96JN0 433 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 QRSL1Q9H0R6 528 aaKnown RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 C20orf85Q9H1P6 137 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 OR6C2Q9NZP2 312 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 IL20RAQ9UHF4 553 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ING1Q9UK53 422 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 PRELID3BQ9Y3B1 194 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 PRKAB1Q9Y478 270 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SIRT4Q9Y6E7 314 aaPredicted RBP9.6□□□□□ -0.87
SKA1-201ENST00000285116 ZNF780BQ9Y6R6 833 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 TRAPPC13A5PLN9 417 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 OR6C65A6NJZ3 312 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 LRRN3E7EW58 273 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 SOCS6O14544 535 aa9.6□□□□□ -0.87
SKA1-201ENST00000285116 ZNF749O43361 778 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms