RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SOX2P48431 317 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF85Q03923 595 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 SRSF5Q13243 272 aaKnown RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 UBE2Q1Q7Z7E8 422 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 MOAP1Q96BY2 351 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GIMAP5Q96F15 307 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 TIMP4Q99727 224 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GAL3ST1Q99999 423 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 NANSQ9NR45 359 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 CES1P1Q9UKY3 287 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ACSL5Q9ULC5 683 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 M0R233 179 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 STX11O75558 287 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 RGS11O94810 467 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 RCBTB2O95199 551 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 IL9P15248 144 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 PEBP1P30086 187 aaKnown RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 LCN1P31025 176 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GABRA3P34903 492 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF136P52737 540 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 BLVRAP53004 296 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 HSF2Q03933 536 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 STX4Q12846 297 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 MRPL43Q8N983 215 aaKnown RBP11.47□□□□□ -0.57
CHMP3-201ENST00000263856 OR8K3Q8NH51 312 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 PRSS27Q9BQR3 290 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 STARD5Q9NSY2 213 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 UBQLN2Q9UHD9 624 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 ADAM18Q9Y3Q7 739 aa11.47□□□□□ -0.57
CHMP3-201ENST00000263856 GXYLT2A0PJZ3 443 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 BHLHE40O14503 412 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 NUPL2O15504 423 aaKnown RBP11.46□□□□□ -0.57
CHMP3-201ENST00000263856 HK1P19367 917 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 PTBP1P26599 531 aaKnown RBP eCLIP11.46□□□□□ -0.574e-7■□□□□ 10.1
CHMP3-201ENST00000263856 TMEM52BQ4KMG9 183 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 DCST2Q5T1A1 773 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 ADAMTSL4Q6UY14 1074 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 PRSS41Q7RTY9 318 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 SRFBP1Q8NEF9 429 aaKnown RBP11.46□□□□□ -0.57
CHMP3-201ENST00000263856 OR5T3Q8NGG3 340 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-201ENST00000263856 ZNF681Q96N22 645 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 ERVMER34-1Q9H9K5 563 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 EMC7Q9NPA0 242 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 HCN3Q9P1Z3 774 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 MGAT4CQ9UBM8 478 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 KLK11Q9UBX7 282 aa11.46□□□□□ -0.57
CHMP3-201ENST00000263856 LOC105371267A0A1B0GV96 52 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 MPC2O95563 127 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 IFNA7P01567 189 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 SLC35G6P0C7Q6 338 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 GSG1Q2KHT4 349 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 DEFB115Q30KQ5 88 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 MRM1Q6IN84 353 aaKnown RBP11.46□□□□□ -0.58
CHMP3-201ENST00000263856 RNF44Q7L0R7 432 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 ZAR1Q86SH2 424 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 GPALPP1Q8IXQ4 340 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 GALNT11Q8NCW6 608 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 GPR137Q96N19 417 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 OR2M2Q96R28 347 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 ADGRL4Q9HBW9 690 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 KCNN3Q9UGI6 736 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 ELF5Q9UKW6 265 aaPredicted RBP11.46□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF346Q9UL40 294 aaKnown RBP11.46□□□□□ -0.58
CHMP3-201ENST00000263856 MAFFQ9ULX9 164 aa11.46□□□□□ -0.58
CHMP3-201ENST00000263856 A0A0G2JK05 382 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CHURC1-FNTBB4DL54 471 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CDC123O75794 336 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TPOP07202 933 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 PVRP15151 417 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 DRD3P35462 400 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 ERVK-21P61565 698 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 RIN1Q13671 783 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 GRK1Q15835 563 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 EIPR1Q53HC9 387 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 OTPQ5XKR4 325 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 RTL4Q6ZR62 310 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 Q6ZTK2 550 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 MEIOBQ8N635 442 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 OR2L8Q8NGY9 312 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CNOT9Q92600 299 aaKnown RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 RIT1Q92963 219 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 SEMA4CQ9C0C4 833 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 FKRPQ9H9S5 495 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM27Q9HBJ8 222 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 DIABLOQ9NR28 239 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 DLL4Q9NR61 685 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 CMC2Q9NRP2 79 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 POT1Q9NUX5 634 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 MYO15AQ9UKN7 3530 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3DA0A087WVF3 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3IA0A087WXS9 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3EA0A087X179 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3KA0A087X1G2 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3FA6NER0 549 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 TBC1D3LB9A6J9 549 aa11.45□□□□□ -0.58
CHMP3-201ENST00000263856 PRKNO60260 465 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-201ENST00000263856 UBL3O95164 117 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms