RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 NOSIPQ9Y314 301 aaKnown RBP7.29□□□□□ -1.24
IFT43-201ENST00000238628 PTGDR2Q9Y5Y4 395 aa7.29□□□□□ -1.24
IFT43-201ENST00000238628 FKBP7Q9Y680 259 aa7.29□□□□□ -1.24
IFT43-201ENST00000238628 IGHV4-61A0A0C4DH41 118 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 LOC390937A0A1W2PQ73 354 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 SULT2B1O00204 365 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ZNF264O43296 627 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 AKAP10O43572 662 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 EIF4E2O60573 245 aaKnown RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 TBX19O60806 448 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 HMGN2P05204 90 aaKnown RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 GSTA1P08263 222 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ARAFP10398 606 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 DIO1P49895 249 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ATP12AP54707 1039 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 CSNK2A1P68400 391 aaPredicted RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 PHC1P78364 1004 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 CBFBQ13951 182 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 KIAA0040Q15053 153 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 QPRTQ15274 297 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 GABRA6Q16445 453 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 OCLNQ16625 522 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 NDUFAF6Q330K2 333 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 TIGD2Q4W5G0 525 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ZNF385BQ569K4 471 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 SLC25A53Q5H9E4 307 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 EXOSC6Q5RKV6 272 aaKnown RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 TMPPEQ6ZT21 453 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 MTDHQ86UE4 582 aaKnown RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 RELL1Q8IUW5 271 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 CCNYL1Q8N7R7 359 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ZNF614Q8N883 585 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 TOR1AIP2Q8NFQ8 470 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 OR5W2Q8NH69 310 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ADAMTS15Q8TE58 950 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 APH1AQ96BI3 265 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ZNF524Q96C55 264 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 METTL2AQ96IZ6 378 aaKnown RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 STACQ99469 402 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 VRK1Q99986 396 aaPredicted RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 SOX7Q9BT81 388 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 GSTO2Q9H4Y5 243 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 ACSS1Q9NUB1 689 aaPredicted RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 ZCCHC3Q9NUD5 404 aaKnown RBP7.28□□□□□ -1.24
IFT43-201ENST00000238628 TAS2R16Q9NYV7 291 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 EMC3Q9P0I2 261 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 DTNAQ9Y4J8 743 aa7.28□□□□□ -1.24
IFT43-201ENST00000238628 H3BQF6 201 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 SLC28A1O00337 649 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 MRPL33O75394 65 aaKnown RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 H6PDO95479 791 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 ZNF23P17027 643 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 EFNA1P20827 205 aaPredicted RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 FRKP42685 505 aaPredicted RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 CCR4P51679 360 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 FOXG1P55316 489 aaPredicted RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 LASP1Q14847 261 aaKnown RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 MLC1Q15049 377 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 PDK3Q15120 406 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 SWI5Q1ZZU3 235 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 MST1LQ2TV78 715 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.27□□□□□ -1.25
IFT43-201ENST00000238628 CDC73Q6P1J9 531 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 C3orf33Q6P1S2 294 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 DEF8Q6ZN54 512 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 TIFABQ6ZNK6 161 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 LCA5Q86VQ0 697 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 TMCO5AQ8N6Q1 288 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 WDR31Q8NA23 367 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 ZNF540Q8NDQ6 660 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 FAM120BQ96EK7 910 aaKnown RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 ZNF764Q96H86 408 aaPredicted RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 TSSK3Q96PN8 268 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 SORCS2Q96PQ0 1159 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 THUMPD3Q9BV44 507 aaKnown RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 QRSL1Q9H0R6 528 aaKnown RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 TSPYL1Q9H0U9 437 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 MYOZ1Q9NP98 299 aaPredicted RBP7.27□□□□□ -1.25
IFT43-201ENST00000238628 DUSP22Q9NRW4 184 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 C1orf109Q9NX04 203 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 UPB1Q9UBR1 384 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 BAIAP2L1Q9UHR4 511 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 AMDHD2Q9Y303 409 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 TRAF6Q9Y4K3 522 aa7.27□□□□□ -1.25
IFT43-201ENST00000238628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.27□□□□□ -1.25
IFT43-201ENST00000238628 IGKV3D-15A0A087WSY6 115 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 A0A087WUV0 522 aaPredicted RBP7.26□□□□□ -1.25
IFT43-201ENST00000238628 ZNF716A6NP11 495 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 NPIPB8E9PQR5 432 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 GPR171O14626 319 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 CYP7B1O75881 506 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 ITGA5P08648 1049 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 TFPIP10646 304 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 UROSP10746 265 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 UBL4AP11441 157 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 PCMT1P22061 227 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 PRPH2P23942 346 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 CASQ1P31415 396 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 NTF4P34130 210 aa7.26□□□□□ -1.25
IFT43-201ENST00000238628 CCT3P49368 545 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms