RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DUSP19Q8WTR2 217 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 SAMD8Q96LT4 415 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 SLC19A3Q9BZV2 496 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 RBM38Q9H0Z9 239 aaKnown RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 OR52D1Q9H346 318 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 ZNF160Q9HCG1 818 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 PCDHGB1Q9Y5G3 927 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 RIF1Q5UIP0 2472 aaKnown RBP13.88□□□□□ -0.19
HDHD3-201ENST00000238379 WDFY3Q8IZQ1 3526 aa13.88□□□□□ -0.19
HDHD3-201ENST00000238379 ELOA3DA6NLF2 546 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 GMFGO60234 142 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 MRPS14O60783 128 aaKnown RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 PTP4A3O75365 173 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ITGA10O75578 1167 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 SAGP10523 405 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 F8A1P23610 371 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ITPKBP27987 946 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 OTX2P32243 289 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 GAS1P54826 345 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 PMS2P3Q13401 168 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 DNASE1L3Q13609 305 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 FHL1Q13642 323 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 NEDD8Q15843 81 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 NTRK2Q16620 822 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 OCLNQ16625 522 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ZNF791Q3KP31 576 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ELOA3BQ3SY89 546 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 SLC25A30Q5SVS4 291 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 CACTIN-AS1Q8N1I8 211 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ELOA3Q8NG57 546 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 GGHQ92820 318 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 NACC2Q96BF6 587 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 B3GNT4Q9C0J1 378 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ENKD1Q9H0I2 346 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 UBQLN3Q9H347 655 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 C12orf10Q9HB07 376 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 HHATLQ9HCP6 504 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 IL20RAQ9UHF4 553 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 SNX5Q9Y5X3 404 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 RGS10O43665 173 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 TLX2O43763 284 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ENTPD6O75354 484 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 RCBTB2O95199 551 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 PGCP20142 388 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 PCMT1P22061 227 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 TACR3P29371 465 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 EMX1Q04741 257 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 C17orf67Q0P5P2 114 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 CBFBQ13951 182 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 PGGHGQ32M88 737 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 RPL13AP3Q6NVV1 102 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 BORAQ6PGQ7 559 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 PRSS48Q7RTY5 328 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 ARMC10Q8N2F6 343 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 OR2T33Q8NG76 320 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 OR10G3Q8NGC4 313 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 B4GALNT2Q8NHY0 566 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 FANK1Q8TC84 345 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 SPACA9Q96E40 222 aaPredicted RBP13.87□□□□□ -0.19
HDHD3-201ENST00000238379 Q96MT0 163 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 TMEM43Q9BTV4 400 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 GPR87Q9BY21 358 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 GPR83Q9NYM4 423 aa13.87□□□□□ -0.19
HDHD3-201ENST00000238379 C2orf72A6NCS6 295 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 B4DXG7 233 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 C21orf140B9A014 251 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 MASP2O00187 686 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 HCN1O60741 890 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 IGF2P01344 180 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 MT-ND2P03891 347 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 SOX3P41225 446 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 SLC15A1P46059 708 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 LIMK1P53667 647 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 COL28A1Q2UY09 1125 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 ZBED5Q49AG3 693 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 THSD4Q6ZMP0 1018 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 BCDIN3DQ7Z5W3 292 aaKnown RBP13.86□□□□□ -0.19
HDHD3-201ENST00000238379 OAFQ86UD1 273 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 OR51A7Q8NH64 312 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 GPR119Q8TDV5 335 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 DGCR14Q96DF8 476 aaKnown RBP13.86□□□□□ -0.19
HDHD3-201ENST00000238379 SGTBQ96EQ0 304 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 SLC38A2Q96QD8 506 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 COPS4Q9BT78 406 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 GALNT9Q9HCQ5 603 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 VCX3AQ9NNX9 186 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 DNAJC27Q9NZQ0 273 aa13.86□□□□□ -0.19
HDHD3-201ENST00000238379 TRAV27A0A087WT01 109 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 HTR3EA5X5Y0 456 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 H3BSA7 217 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 BHLHE40O14503 412 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 SURF4O15260 269 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 MAN1A2O60476 641 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 CDC40O60508 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDHD3-201ENST00000238379 RAD1O60671 282 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 WISP1O95388 367 aa13.85□□□□□ -0.19
HDHD3-201ENST00000238379 NUDT14O95848 222 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms