RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CLDN11O75508 207 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 GJB3O75712 270 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 GLP1RP43220 463 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 GNG10P50151 68 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 PJVKQ0ZLH3 352 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 TGIF1Q15583 401 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 USF2Q15853 346 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 C9orf57Q5W0N0 161 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 FAAP20Q6NZ36 180 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 LRRTM1Q86UE6 522 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 GTPBP8Q8N3Z3 284 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 OR5D16Q8NGK9 328 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 TRIM62Q9BVG3 475 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 KLK11Q9UBX7 282 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ZNF282Q9UDV7 671 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 FBXL21Q9UKT6 434 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 KCNE1BA0A087WTH5 132 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ADH6P28332 368 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 TTPAP49638 278 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 MAPK14Q16539 360 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 NDUFA9Q16795 377 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 SDHAF4Q5VUM1 108 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 POMZP3Q6PJE2 187 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 UBAC2Q8NBM4 344 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 BBS10Q8TAM1 723 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 CPNE2Q96FN4 548 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 ALG8Q9BVK2 526 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 ISG20L2Q9H9L3 353 aaKnown RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 TMEM27Q9HBJ8 222 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 CRLF2Q9HC73 371 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 MYOZ1Q9NP98 299 aaPredicted RBP12.09□□□□□ -0.47
MSH2-201ENST00000233146 KLHL9Q9P2J3 617 aa12.09□□□□□ -0.47
MSH2-201ENST00000233146 FMO6PO60774 539 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 H1F0P07305 194 aaKnown RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 TRAM1Q15629 374 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 LIPNQ5VXI9 398 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 OR10K2Q6IF99 312 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 TCTN3Q6NUS6 607 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 MRGPREQ86SM8 312 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 C1QL4Q86Z23 238 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 OR52N2Q8NGI0 321 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 SUCNR1Q9BXA5 334 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 FAM96BQ9Y3D0 163 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 hCG_1809904A0A1W2PP81 198 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 A0A1W2PR64 198 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 A0A1W2PRV1 198 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 EPHX1P07099 455 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 TBXA2RP21731 343 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 MAT2AP31153 395 aaKnown RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 OR2B8PP59922 312 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 HSD11B2P80365 405 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 NAE1Q13564 534 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 RSU1Q15404 277 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 NSUN5P2Q63ZY6 315 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 GAREM2Q75VX8 874 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 PXKQ7Z7A4 578 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 LRRC56Q8IYG6 542 aaPredicted RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 SLC7A13Q8TCU3 470 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 BRIX1Q8TDN6 353 aaKnown RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 P2RY12Q9H244 342 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 ASF1AQ9Y294 204 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 SLC35A3Q9Y2D2 325 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 MYO10Q9HD67 2058 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 EVPLQ92817 2033 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 IDSB3KWA1 339 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 MAN2B1O00754 1011 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 SCAMP2O15127 329 aaKnown RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 TRBC1P01850 177 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 RAB41Q5JT25 222 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 GLT8D1Q68CQ7 371 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 UBE2R2Q712K3 238 aaPredicted RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 RTL10Q7L3V2 364 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 CEACAM19Q7Z692 300 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 CMTM4Q8IZR5 234 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 ARMC5Q96C12 935 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 MTERF1Q99551 399 aaKnown RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 MRPS30Q9NP92 439 aaKnown RBP12.08□□□□□ -0.48
MSH2-201ENST00000233146 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
MSH2-201ENST00000233146 A0A1W2PRQ8 180 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 RNF222A6NCQ9 220 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 OR10H2O60403 315 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 CD8AP01732 235 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 SFTA3P0C7M3 94 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 AKR1C3P42330 323 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 MAGEB1P43366 347 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 CDH11P55287 796 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 SLC7A9P82251 487 aa12.07□□□□□ -0.48
MSH2-201ENST00000233146 ELAVL1Q15717 326 aaKnown RBP12.07□□□□□ -0.48
MSH2-201ENST00000233146 ZNF630Q2M218 657 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms