RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 RBMS1P29558 406 aaKnown RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 BLKP51451 505 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 STX4Q12846 297 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 FHL1Q13642 323 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 FZD2Q14332 565 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 DMKNQ6E0U4 476 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 ZNF614Q8N883 585 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 AVL9Q8NBF6 648 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 FAM174AQ8TBP5 190 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 C4orf36Q96KX1 117 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 PTCHD1Q96NR3 888 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 CCNL2Q96S94 520 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 Q9N2J8 555 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 FAM60AQ9NP50 221 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 EXTL2Q9UBQ6 330 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 MALT1Q9UDY8 824 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 CD207Q9UJ71 328 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 ZMIZ1Q9ULJ6 1067 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 ICAM5Q9UMF0 924 aa20.25■□□□□ 0.83
SMARCD2-201ENST00000225742 FAM240BA0A1B0GVZ2 78 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 J3QLW9 94 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 PRAMEF2O60811 474 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 SLC43A1O75387 559 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 IGKV1D-16P01601 117 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 ZNF19P17023 458 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 ATP12AP54707 1039 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 CLDN20P56880 219 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 LGALS3BPQ08380 585 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 GGTLC2Q14390 218 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 COL13A1Q5TAT6 717 aaPredicted RBP20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 CEACAM19Q7Z692 300 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 SHISA5Q8N114 240 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 SYS1Q8N2H4 156 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 HMGB4Q8WW32 186 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 SGTBQ96EQ0 304 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 CHRNA9Q9UGM1 479 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 NPFFR2Q9Y5X5 522 aa20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 MKI67P46013 3256 aaKnown RBP20.24■□□□□ 0.83
SMARCD2-201ENST00000225742 F5P12259 2224 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 OR2T7P0C7T2 308 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 NPR2P20594 1047 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 SHC1P29353 583 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 PPP1CAP62136 330 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ACTA2P62736 377 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ACTG2P63267 376 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 TIGD3Q6B0B8 471 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 FAAH2Q6GMR7 532 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ZNF440Q8IYI8 595 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 OR6C4Q8NGE1 309 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 OR2T27Q8NH04 317 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ZDHHC1Q8WTX9 485 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 OIT3Q8WWZ8 545 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 MRPL48Q96GC5 212 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 TMEM165Q9HC07 324 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ENAMQ9NRM1 1142 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 NUFIP1Q9UHK0 495 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 TRAV1-2A0A0B4J238 106 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 E9PI62 339 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 CLDN4O14493 209 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 OGG1O15527 345 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 YES1P07947 543 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 CELA2BP08218 269 aaPredicted RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 MRPL3P09001 348 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 THEGLP0DJG4 465 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 GLULP15104 373 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 THBS2P35442 1172 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 MRPS15P82914 257 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 CSTF1Q05048 431 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 CRYZQ08257 329 aaKnown RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ISXQ2M1V0 245 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 SFXN4Q6P4A7 337 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 NR2C2APQ86WQ0 139 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 TCTE3Q8IZS6 198 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 DGAT2Q96PD7 388 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 ERMAPQ96PL5 475 aaPredicted RBP20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 MARVELD1Q9BSK0 173 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 MFRPQ9BY79 579 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 CAPN10Q9HC96 672 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 PRTFDC1Q9NRG1 225 aa20.23■□□□□ 0.83
SMARCD2-201ENST00000225742 LAMA2P24043 3122 aaKnown RBP20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 A0A0B4J293 547 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 HRO43593 1189 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 HCRTR1O43613 425 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 ORC5O43913 435 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 NGFRP08138 427 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 ALAS2P22557 587 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 GALNSP34059 522 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 E2F1Q01094 437 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 SLC3A1Q07837 685 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 CDK10Q15131 360 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 FCRLBQ6BAA4 426 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 ZC3H14Q6PJT7 736 aaKnown RBP20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 DPY19L2P2Q6ZN68 376 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 ZNF438Q7Z4V0 828 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 LIX1LQ8IVB5 337 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 SFTPA2Q8IWL1 248 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 RNF31Q96EP0 1072 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 PGLYRP3Q96LB9 341 aa20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 CNN2Q99439 309 aaKnown RBP20.22■□□□□ 0.83
SMARCD2-201ENST00000225742 GDF15Q99988 308 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms