RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Stoml3Q6PE84 287 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Ddhd2Q80Y98 699 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Lypd4Q8BVP6 246 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 EloaQ8CB77 773 aaKnown RBP9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Ffar2Q8VCK6 330 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Asb18Q8VHA6 467 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Vsx1Q91V10 363 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Brinp1Q920P3 760 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 MINDY3Q9CV28 444 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Sohlh2Q9D489 467 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Prss23Q9D6X6 382 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Fzd9Q9R216 592 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 MstnO08689 376 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Crhr1P35347 415 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Tmem64Q3U145 381 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Fut10Q5F2L2 481 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Sez6Q7TSK2 991 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 SynprQ8BGN8 265 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Nob1Q8BW10 403 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Vmn1r21Q8R2C6 297 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Fam3cQ91VU0 227 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Frs3Q91WJ0 492 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 OxsmQ9D404 459 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Kcnmb4Q9JIN6 210 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Nwd2Q6P5U7 1742 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Baz2bA2AUY4 2123 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 GzmeP08884 248 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Cds1P98191 461 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 ArhgdibQ61599 200 aaKnown RBP9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Tas2r120Q7M721 295 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Spata7Q80VP2 582 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Rdh1Q8CGV4 317 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Olfr353Q8VGK0 311 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Ddit4lQ8VHZ5 193 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Rpe65Q91ZQ5 533 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Lrrc18Q9CQ07 262 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Bex4Q9CWT2 118 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Dnajb8Q9QYI7 227 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Nfkb2Q9WTK5 899 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Klhl15A2AAX3 604 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Zfp26P10076 861 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Cav3P51637 151 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 VaspP70460 375 aaKnown RBP9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Gdf3Q07104 366 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Pdss2Q33DR3 401 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Fn3krpQ8K274 309 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Pbx4Q99NE9 378 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Slc25a46Q9CQS4 418 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Mageh1Q9NWG9 218 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Slc7a11Q9WTR6 502 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Zfp982A2A8Q4 368 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Gm12695A2AGB2 545 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Gm10800D3Z496 220 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Prps1l3G3UXL2 318 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Gm3727J3QM54 205 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 H2-K1P01901 369 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Dusp5Q1HL35 384 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Q3UUX7 111 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Sqstm1Q64337 442 aaKnown RBP9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 NelfaQ8BG30 530 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 H1fntQ8CJI4 398 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Dyrk3Q922Y0 586 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Rab30Q923S9 203 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Prps1Q9D7G0 318 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Usp18Q9WTV6 368 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 D430041D05RikF6ZGR6 1678 aa9.26□□□□□ -0.93
Syne1-201ENSMUST00000041639 Igkv18-36A0A075B5M9 114 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Trbv20A0A0B4J1H5 111 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Gm5141A0A0J9YUW3 581 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 4930402F06RikA2AUQ8 332 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Olfr68E9PYY2 315 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 PipP02816 146 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Klf1P46099 358 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 AgrpP56473 131 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Wdr5P61965 334 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Rsu1Q01730 277 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Uba1Q02053 1058 aaKnown RBP9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 B4galnt2Q09199 510 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Defb41Q30KP6 65 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Prr27Q3SYJ2 352 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 ShhQ62226 437 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Dcaf13Q6PAC3 445 aaKnown RBP9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Chil6Q80W26 440 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 PimregQ8BFY7 231 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Peli2Q8BST6 419 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Olfr551Q8VG23 315 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Olfr340Q8VGL0 312 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 EdaraddQ8VHX2 208 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Kti12Q9D1R2 351 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Extl1Q9JKV7 669 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Cav2Q9WVC3 162 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Arid1aA2BH40 2283 aaKnown RBP9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Sstr2P30875 369 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 RetP35546 1115 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Tff2Q03404 129 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 TpppQ7TQD2 218 aaKnown RBP9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Olfr1115Q7TR53 326 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Nyap2Q8BM65 682 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Tmem163Q8C996 288 aa9.25□□□□□ -0.93
Syne1-201ENSMUST00000041639 Vmn1r215Q8R264 300 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms