RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 Q9N2J8 555 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 PALMDQ9NP74 551 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CTPS2Q9NRF8 586 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TESQ9UGI8 421 aaKnown RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ERGIC3Q9Y282 383 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM5Q9Y2B1 443 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CHST2Q9Y4C5 530 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GON4LQ3T8J9 2241 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CDHR4A6H8M9 788 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TLX2O43763 284 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 LCKP06239 509 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 S1PR1P21453 382 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 DRD5P21918 477 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 BCKDHBP21953 392 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 EVI2BP34910 448 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GFERP55789 205 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ARF1P84077 181 aaKnown RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 SRSF2Q01130 221 aaKnown RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 RHAGQ02094 409 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CCNJQ5T5M9 372 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 MRPL2Q5T653 305 aaKnown RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF613Q6PF04 617 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 FIGNL1Q6PIW4 674 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ASCL5Q7RTU5 278 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 MRGPREQ86SM8 312 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 NLGN4XQ8N0W4 816 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CLDN22Q8N7P3 220 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TBC1D15Q8TC07 691 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 OR1F2PQ96R84 312 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 ATP6V0BQ99437 205 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 RHNO1Q9BSD3 238 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 TSSK6Q9BXA6 273 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 SPRTNQ9H040 489 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 MED17Q9NVC6 651 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 GMEB2Q9UKD1 530 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CFL2Q9Y281 166 aa6.61□□□□□ -1.35
BRCA1-230ENST00000634433 CHTOPQ9Y3Y2 248 aaKnown RBP6.61□□□□□ -1.35
BRCA1-230ENST00000634433 IGHV1OR21-1A0A087WYE8 117 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 GXYLT2A0PJZ3 443 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM150CB9EJG8 249 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 HRO43593 1189 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SDC3O75056 442 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 OR2B3O76000 313 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 IFNA16P05015 189 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 RPLP0P05388 317 aaKnown RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 CTSBP07858 339 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 HPGDP15428 266 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 CD1CP29017 333 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 GCH1P30793 250 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 UGT2B10P36537 528 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 EMDP50402 254 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF136P52737 540 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 OR1D5P58170 312 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 FUT7Q11130 342 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 BNIP3Q12983 259 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 OR1Q1Q15612 314 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 MAPK14Q16539 360 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF829Q3KNS6 432 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 RPL13AP3Q6NVV1 102 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF550Q7Z398 422 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF565Q8N9K5 539 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM163Q8TC26 289 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 RFKQ969G6 155 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 BORCS5Q969J3 196 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 LGALS12Q96DT0 336 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ABHD17AQ96GS6 310 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 FAM46AQ96IP4 442 aaKnown RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 PLEKHA8Q96JA3 519 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 VSTM2LQ96N03 204 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 TRIM2Q9C040 744 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 CUTCQ9NTM9 273 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 UCKL1Q9NWZ5 548 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SEMA5BQ9P283 1151 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SERTAD3Q9UJW9 196 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SLC7A7Q9UM01 511 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 CAMK2AQ9UQM7 478 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM131Q92545 1883 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 A0A1B0GVT2 93 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 EFCAB9A8MZ26 197 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 M0R129 80 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 TAF4O00268 1085 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 AIREO43918 545 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 DCNP07585 359 aaKnown RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 IGFBP1P08833 259 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ADORA3P0DMS8 318 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SERPINF1P36955 418 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 MAT1AQ00266 395 aaKnown RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 C1DQ13901 141 aaKnown RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SPCS2Q15005 226 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ARMCX4Q5H9R4 360 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 NKAIN2Q5VXU1 208 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 ACSM5Q6NUN0 579 aa6.6□□□□□ -1.35
BRCA1-230ENST00000634433 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-230ENST00000634433 SLC46A3Q7Z3Q1 461 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms