RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PLSCR4Q9NRQ2 329 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 RASSF1Q9NS23 344 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 SLC6A13Q9NSD5 602 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 ACER3Q9NUN7 267 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 NDRG3Q9UGV2 375 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 EDARQ9UNE0 448 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 GMEB1Q9Y692 573 aa20.02■□□□□ 0.8
SF1-220ENST00000626028 HRNRQ86YZ3 2850 aaPredicted RBP20.01■□□□□ 0.79
SF1-220ENST00000626028 A0A096LPI6 279 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 TMEM247A6NEH6 219 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 A6NNC1 897 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 CYP7B1O75881 506 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 SMNDC1O75940 238 aaKnown RBP eCLIP20.01■□□□□ 0.79
SF1-220ENST00000626028 SASH3O75995 380 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 DBIP07108 87 aaKnown RBP20.01■□□□□ 0.79
SF1-220ENST00000626028 CHRM4P08173 479 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 SFTPDP35247 375 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 APOBEC1P41238 236 aaKnown RBP20.01■□□□□ 0.79
SF1-220ENST00000626028 MAP2K6P52564 334 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 CRISP3P54108 245 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 CTBP2P56545 445 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 SESN3P58005 492 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 KRTAP10-9P60411 292 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 RAC3P60763 192 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 ZNF239Q16600 458 aaKnown RBP20.01■□□□□ 0.79
SF1-220ENST00000626028 COX20Q5RI15 118 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 PEX5LQ8IYB4 626 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 SLC43A2Q8N370 569 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 ARFGAP2Q8N6H7 521 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 RNF128Q8TEB7 428 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 ZG16BQ96DA0 208 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 TACO1Q9BSH4 297 aaKnown RBP20.01■□□□□ 0.79
SF1-220ENST00000626028 FANCFQ9NPI8 374 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 PROCRQ9UNN8 238 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 SPIN1Q9Y657 262 aaPredicted RBP20.01■□□□□ 0.79
SF1-220ENST00000626028 DSPPQ9NZW4 1301 aa20.01■□□□□ 0.79
SF1-220ENST00000626028 FREM1Q5H8C1 2179 aa20■□□□□ 0.79
SF1-220ENST00000626028 FAAHO00519 579 aa20■□□□□ 0.79
SF1-220ENST00000626028 UQCRBP14927 111 aa20■□□□□ 0.79
SF1-220ENST00000626028 IL7RP16871 459 aa20■□□□□ 0.79
SF1-220ENST00000626028 SLC7A1P30825 629 aa20■□□□□ 0.79
SF1-220ENST00000626028 CD79BP40259 229 aa20■□□□□ 0.79
SF1-220ENST00000626028 CRATP43155 626 aa20■□□□□ 0.79
SF1-220ENST00000626028 HTR3AP46098 478 aa20■□□□□ 0.79
SF1-220ENST00000626028 RNF144AP50876 292 aaPredicted RBP20■□□□□ 0.79
SF1-220ENST00000626028 DSTNP60981 165 aa20■□□□□ 0.79
SF1-220ENST00000626028 TMEM176BQ3YBM2 270 aaPredicted RBP20■□□□□ 0.79
SF1-220ENST00000626028 PRAMEF8Q5VWM4 474 aa20■□□□□ 0.79
SF1-220ENST00000626028 PRAMEF7Q5VXH5 474 aa20■□□□□ 0.79
SF1-220ENST00000626028 DNAJC14Q6Y2X3 702 aaPredicted RBP20■□□□□ 0.79
SF1-220ENST00000626028 CDH24Q86UP0 819 aa20■□□□□ 0.79
SF1-220ENST00000626028 ZNF440Q8IYI8 595 aa20■□□□□ 0.79
SF1-220ENST00000626028 PNPT1Q8TCS8 783 aaKnown RBP20■□□□□ 0.79
SF1-220ENST00000626028 PAIP1Q9H074 479 aaKnown RBP20■□□□□ 0.79
SF1-220ENST00000626028 DNAJB12Q9NXW2 375 aaKnown RBP20■□□□□ 0.79
SF1-220ENST00000626028 TRIM33Q9UPN9 1127 aa20■□□□□ 0.79
SF1-220ENST00000626028 PCDHB14Q9Y5E9 798 aa20■□□□□ 0.79
SF1-220ENST00000626028 C1QCP02747 245 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 TFPTP0C1Z6 253 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 BMP2P12643 396 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 PPIBP23284 216 aaKnown RBP19.99■□□□□ 0.79
SF1-220ENST00000626028 CPOXP36551 454 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 CLK1P49759 484 aaKnown RBP19.99■□□□□ 0.79
SF1-220ENST00000626028 SQLEQ14534 574 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 LRIF1Q5T3J3 769 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 PLEKHM3Q6ZWE6 761 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 OLIG3Q7RTU3 272 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 GRINAQ7Z429 371 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 FUNDC1Q8IVP5 155 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 WDR60Q8WVS4 1066 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 SPDL1Q96EA4 605 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 POLDIP3Q9BY77 421 aaKnown RBP19.99■□□□□ 0.79
SF1-220ENST00000626028 MRGBPQ9NV56 204 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 CCDC167Q9P0B6 97 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 AKAP6Q13023 2319 aa19.99■□□□□ 0.79
SF1-220ENST00000626028 A0A0G2JPF8 293 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 SH3D21A4FU49 640 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 HNRNPCL2B2RXH8 293 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 HNRNPCL3B7ZW38 293 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 CLIC1O00299 241 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 HNRNPCL1O60812 293 aaKnown RBP19.98■□□□□ 0.79
SF1-220ENST00000626028 EDF1O60869 148 aaKnown RBP19.98■□□□□ 0.79
SF1-220ENST00000626028 OPN1LWP04000 364 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 THBS1P07996 1170 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 HNRNPCL4P0DMR1 293 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 ETFAP13804 333 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 HOXB9P17482 250 aaPredicted RBP19.98■□□□□ 0.79
SF1-220ENST00000626028 SHC1P29353 583 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 SIRPAP78324 504 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 MERTKQ12866 999 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 SNTB1Q13884 538 aaKnown RBP19.98■□□□□ 0.79
SF1-220ENST00000626028 RGNQ15493 299 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 METTL21CQ5VZV1 264 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 PPP4R4Q6NUP7 873 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 ZNF474Q6S9Z5 364 aaPredicted RBP19.98■□□□□ 0.79
SF1-220ENST00000626028 STK32CQ86UX6 486 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 ZNF563Q8TA94 476 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 SLC38A5Q8WUX1 472 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 ZNF524Q96C55 264 aa19.98■□□□□ 0.79
SF1-220ENST00000626028 CCDC106Q9BWC9 280 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms