RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ITGA10O75578 1167 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 OR6B1O95007 311 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 PNMTP11086 282 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 PGCP20142 388 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 F8A1P23610 371 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CHMP24386 653 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ITPKBP27987 946 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 POU1F1P28069 291 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 IDH2P48735 452 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SSR4P51571 173 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 P2RX1P51575 399 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 MLF1P58340 268 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ISL1P61371 349 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 IL5RAQ01344 420 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 PRKCDQ05655 676 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CD47Q08722 323 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 C17orf67Q0P5P2 114 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CHAF1BQ13112 559 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 IL10RAQ13651 578 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 RAPSNQ13702 412 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 BLMHQ13867 455 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 NTRK2Q16620 822 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ZNF791Q3KP31 576 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 TMEM154Q6P9G4 183 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CBLN3Q6UW01 205 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 LINC00114Q6XXX2 140 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 WDR88Q6ZMY6 472 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 RASSF6Q6ZTQ3 369 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 MARCH9Q86YJ5 346 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 DEPDC4Q8N2C3 294 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 OR5W2Q8NH69 310 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 B4GALNT2Q8NHY0 566 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ZNF563Q8TA94 476 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 RNF138Q8WVD3 245 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 HDAC2Q92769 488 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ARSGQ96EG1 525 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SH3YL1Q96HL8 342 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 FAM46AQ96IP4 442 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 NODALQ96S42 347 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ZNF426Q9BUY5 554 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 RTN4RQ9BZR6 473 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 GPN2Q9H9Y4 310 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SDHAF3Q9NRP4 125 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CDV3Q9UKY7 258 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ICAM5Q9UMF0 924 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 A0A087WUJ7 227 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 UNC119BA6NIH7 251 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ELOA3DA6NLF2 546 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 EIF4E1BA6NMX2 242 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ZAR1LA6NP61 321 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 PIP5K1CO60331 668 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 NTN1O95631 604 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 GP1BBP13224 206 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 IFI30P13284 250 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SOX3P41225 446 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SLC1A3P43003 542 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SUMO3P55854 103 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CTBP2P56545 445 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CDC42P60953 191 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SNTA1Q13424 505 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 TOP3AQ13472 1001 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ATP1A4Q13733 1029 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CBFBQ13951 182 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 PTGES3Q15185 160 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ELOA3BQ3SY89 546 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 KCTD21Q4G0X4 260 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 RBM48Q5RL73 367 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 C6orf141Q5SZD1 244 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SLX4IPQ5VYV7 408 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 JMJD6Q6NYC1 403 aaPredicted RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 TMPRSS11FQ6ZWK6 438 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 DTX1Q86Y01 620 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ELOA3Q8NG57 546 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 OR10G3Q8NGC4 313 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 DUSP19Q8WTR2 217 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ASB15Q8WXK1 588 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 OSTF1Q92882 214 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 HPS1Q92902 700 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 C3orf49Q96BT1 292 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SECISBP2Q96T21 854 aaKnown RBP6.39□□□□□ -1.39
CBWD3-219ENST00000622817 GPA33Q99795 319 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 SLC19A3Q9BZV2 496 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CDCP1Q9H5V8 836 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 METTL7AQ9H8H3 244 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 C12orf10Q9HB07 376 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ASCL3Q9NQ33 180 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 BATF3Q9NR55 127 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 IMPAD1Q9NX62 359 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 DLL3Q9NYJ7 618 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 KLRF1Q9NZS2 232 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 CNIH4Q9P003 139 aa6.39□□□□□ -1.39
CBWD3-219ENST00000622817 ADAM10O14672 748 aa6.38□□□□□ -1.39
CBWD3-219ENST00000622817 MPZL2O60487 215 aa6.38□□□□□ -1.39
CBWD3-219ENST00000622817 CDC40O60508 579 aaKnown RBP eCLIP6.38□□□□□ -1.39
CBWD3-219ENST00000622817 SOX14O95416 240 aa6.38□□□□□ -1.39
CBWD3-219ENST00000622817 NUDT14O95848 222 aa6.38□□□□□ -1.39
CBWD3-219ENST00000622817 TP53P04637 393 aaPredicted RBP6.38□□□□□ -1.39
CBWD3-219ENST00000622817 ELK4P28324 431 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms