RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 LINC00114Q6XXX2 140 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 CCDC81Q6ZN84 652 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 CLVS1Q8IUQ0 354 aaPredicted RBP19.64■□□□□ 0.73
SPAST-204ENST00000621856 OR5M3Q8NGP4 307 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 ZNF563Q8TA94 476 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 C3orf49Q96BT1 292 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 RTN4RQ9BZR6 473 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 GPR83Q9NYM4 423 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 PCDHGA1Q9Y5H4 931 aa19.64■□□□□ 0.73
SPAST-204ENST00000621856 A0A087WUJ7 227 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 CCDC187A0A096LP49 1063 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 TLX2O43763 284 aaPredicted RBP19.63■□□□□ 0.73
SPAST-204ENST00000621856 GMFGO60234 142 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 FADS2O95864 444 aaKnown RBP19.63■□□□□ 0.73
SPAST-204ENST00000621856 PCMT1P22061 227 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 MAP2K4P45985 399 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 EMX1Q04741 257 aaPredicted RBP19.63■□□□□ 0.73
SPAST-204ENST00000621856 SLC30A6Q6NXT4 461 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 STX19Q8N4C7 294 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 OR52L1Q8NGH7 329 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 OR13C2Q8NGS9 318 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 OR4Q3Q8NH05 313 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 DEFB126Q9BYW3 111 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 FKBP14Q9NWM8 211 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 EXPH5Q8NEV8 1989 aa19.63■□□□□ 0.73
SPAST-204ENST00000621856 IGHV1-45A0A0A0MS14 117 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 EFCAB10A6NFE3 127 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 ELOA3DA6NLF2 546 aaPredicted RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 ENO4A6NNW6 628 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 PLD2O14939 933 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 FADS1O60427 444 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 EIF4E2O60573 245 aaKnown RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 CDK1P06493 297 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 CD63P08962 238 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 ITPKBP27987 946 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 FBXW4P57775 412 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 OCLNQ16625 522 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 PGGHGQ32M88 737 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 ELOA3BQ3SY89 546 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 ELOA3Q8NG57 546 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 BRIX1Q8TDN6 353 aaKnown RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 MUL1Q969V5 352 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 LHPPQ9H008 270 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 ZNF700Q9H0M5 742 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 OR52D1Q9H346 318 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 TOR4AQ9NXH8 423 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 RSL24D1Q9UHA3 163 aaKnown RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 IL20RAQ9UHF4 553 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 PCDHGB1Q9Y5G3 927 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 CACNA1HO95180 2353 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 TMEM200CA6NKL6 621 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 ZNF354AO60765 605 aaPredicted RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 RCBTB2O95199 551 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 NADKO95544 446 aaPredicted RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 PNMTP11086 282 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 BMP7P18075 431 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 MASP1P48740 699 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 MLLT10P55197 1068 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 RPL13AP3Q6NVV1 102 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 MRGPREQ86SM8 312 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 CYP4Z2PQ8N1L4 340 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 FAM26EQ8N5C1 309 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 OR2T33Q8NG76 320 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 OR13F1Q8NGS4 319 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 FAR1Q8WVX9 515 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 RORBQ92753 470 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 PLEKHA8Q96JA3 519 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 CCNL2Q96S94 520 aaPredicted RBP19.62■□□□□ 0.73
SPAST-204ENST00000621856 HS3ST3B1Q9Y662 390 aa19.62■□□□□ 0.73
SPAST-204ENST00000621856 HCN1O60741 890 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 LRP3O75074 770 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 NUDT14O95848 222 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 CH25HO95992 272 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 IGHEP01854 428 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 STSP08842 583 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 COX6A1P12074 109 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 MVKQ03426 396 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 TCF15Q12870 199 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 TRIP6Q15654 476 aaKnown RBP19.61■□□□□ 0.73
SPAST-204ENST00000621856 HES3Q5TGS1 186 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 TMEM163Q8TC26 289 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 SLC22A8Q8TCC7 542 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 NMD3Q96D46 503 aaKnown RBP19.61■□□□□ 0.73
SPAST-204ENST00000621856 TMCO6Q96DC7 493 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 SGTBQ96EQ0 304 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 CNOT2Q9NZN8 540 aaKnown RBP19.61■□□□□ 0.73
SPAST-204ENST00000621856 MYOTQ9UBF9 498 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 ICAM5Q9UMF0 924 aa19.61■□□□□ 0.73
SPAST-204ENST00000621856 ZNF99A8MXY4 864 aaPredicted RBP19.6■□□□□ 0.73
SPAST-204ENST00000621856 SEC14L2O76054 403 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 DLGAP3O95886 979 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 HMGN1P05114 100 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 NAGAP17050 411 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 TCN2P20062 427 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 ST3GAL4Q11206 333 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 EIF3IQ13347 325 aaKnown RBP19.6■□□□□ 0.73
SPAST-204ENST00000621856 TUBA3CQ13748 450 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 EXT1Q16394 746 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 TMEM164Q5U3C3 297 aa19.6■□□□□ 0.73
SPAST-204ENST00000621856 GPR107Q5VW38 600 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms