RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ZNF337Q9Y3M9 751 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 ERICH4A6NGS2 130 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 B8ZZF3 427 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 IGHG3P01860 377 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 THY1P04216 161 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 SHC1P29353 583 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 YAP1P46937 504 aaKnown RBP12.33□□□□□ -0.44
NEK3-210ENST00000620675 ZNF41P51814 821 aaPredicted RBP12.33□□□□□ -0.44
NEK3-210ENST00000620675 GFRA1P56159 465 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 SPATS1Q496A3 300 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 CADM2Q8N3J6 435 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 ZNF563Q8TA94 476 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 NSMCE2Q96MF7 247 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 ACKR4Q9NPB9 350 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
NEK3-210ENST00000620675 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.44
NEK3-210ENST00000620675 TRGV5A0A0B4J1U4 118 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 J3KTA2 159 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 SYT5O00445 386 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 PEPDP12955 493 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 C19orf57Q0VDD7 668 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 FOXD4Q12950 439 aaPredicted RBP12.33□□□□□ -0.44
NEK3-210ENST00000620675 LCN8Q6JVE9 175 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 PLXDC2Q6UX71 529 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 DHFR2Q86XF0 187 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 NEIL3Q8TAT5 605 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 AMBRA1Q9C0C7 1298 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 LDAHQ9H6V9 325 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
NEK3-210ENST00000620675 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
NEK3-210ENST00000620675 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 CPSF4LA6NMK7 179 aaKnown RBP12.32□□□□□ -0.44
NEK3-210ENST00000620675 DIRAS1O95057 198 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 MT-ND1P03886 318 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 BMP7P18075 431 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 PGCP20142 388 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 CCNA2P20248 432 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 SUMO3P55854 103 aaPredicted RBP12.32□□□□□ -0.44
NEK3-210ENST00000620675 CLDN15P56746 228 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 MRPL49Q13405 166 aaKnown RBP12.32□□□□□ -0.44
NEK3-210ENST00000620675 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
NEK3-210ENST00000620675 GANABQ14697 944 aaKnown RBP12.32□□□□□ -0.44
NEK3-210ENST00000620675 ATP6V1C2Q8NEY4 427 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 PROX1Q92786 737 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 SFXN2Q96NB2 322 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 UGT2B28Q9BY64 529 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 EXO5Q9H790 373 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 AGPAT4Q9NRZ5 378 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 ADPRHL2Q9NX46 363 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 SLC13A4Q9UKG4 626 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 BAG5Q9UL15 447 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
NEK3-210ENST00000620675 KDM4EB2RXH2 506 aaPredicted RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 NPIPA2E9PIF3 369 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 NPIPA3F8WFD2 350 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 H3BML4 177 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 IFNA14P01570 189 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 C8BP07358 591 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 CLDN20P56880 219 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 VLDLRP98155 873 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 MERTKQ12866 999 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 DEF8Q6ZN54 512 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 PLEKHM3Q6ZWE6 761 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 FKBP9P1Q75LS8 142 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 ZNF550Q7Z398 422 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 GTPBP8Q8N3Z3 284 aaPredicted RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 BHLHE22Q8NFJ8 381 aaPredicted RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 PHF10Q8WUB8 498 aaKnown RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 SMPDL3BQ92485 455 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 C3orf49Q96BT1 292 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 SEPHS2Q99611 448 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 MCHR1Q99705 422 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 ARMC7Q9H6L4 198 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 KLHL28Q9NXS3 571 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 MRPS18CQ9Y3D5 142 aaKnown RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 UTP20O75691 2785 aaKnown RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 A0A1B0GWA3 101 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 ETV2O00321 342 aaPredicted RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 GMNNO75496 209 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 SEMG1P04279 462 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 TACR3P29371 465 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 UQCRFS1P47985 274 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 SLC6A8P48029 635 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 LHX2P50458 406 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 CRYZQ08257 329 aaKnown RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 PIN1Q13526 163 aaPredicted RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 FLOT2Q14254 428 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 OR1Q1Q15612 314 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 IQCCQ4KMZ1 466 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 EMC4Q5J8M3 183 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 ENTPD8Q5MY95 495 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 YTHDF3Q7Z739 585 aaKnown RBP12.31□□□□□ -0.44
NEK3-210ENST00000620675 ADGRG3Q86Y34 549 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 P3H2Q8IVL5 708 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 ZNF440Q8IYI8 595 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 OR52E4Q8NGH9 312 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 OR5M9Q8NGP3 310 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 RASSF5Q8WWW0 418 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 C7orf34Q96L11 122 aa12.31□□□□□ -0.44
NEK3-210ENST00000620675 ADAM19Q9H013 955 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms