RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ME2P23368 584 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 RYKP34925 604 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
RNF40-212ENST00000602784 SLC1A3P43003 542 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 KCNJ5P48544 419 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 IDH2P48735 452 aaKnown RBP12.52□□□□□ -0.41
RNF40-212ENST00000602784 STARP49675 285 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 GSK3BP49841 420 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 MAP2K6P52564 334 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 FOXF1Q12946 379 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 RTL6Q6ICC9 239 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 C16orf89Q6UX73 402 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 GRINAQ7Z429 371 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 FJX1Q86VR8 437 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 FAM26EQ8N5C1 309 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 OR5M1Q8NGP8 315 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 ZNF563Q8TA94 476 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 NPAS1Q99742 590 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 CALHM2Q9HA72 323 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 KLHL28Q9NXS3 571 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.41
RNF40-212ENST00000602784 USP22Q9UPT9 525 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 CAMK2AQ9UQM7 478 aa12.52□□□□□ -0.41
RNF40-212ENST00000602784 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 GJE1A6NN92 205 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 B2RBV5 119 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SHISA8B8ZZ34 492 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 H3BML4 177 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 AP3D1O14617 1153 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 ADAMDEC1O15204 470 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 EFNA2O43921 213 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SEMA7AO75326 666 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 LGI1O95970 557 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 KDELR2P33947 212 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 CPOXP36551 454 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 CRYBA2P53672 197 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 CLDN15P56746 228 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 COPZ1P61923 177 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SLC25A3Q00325 362 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
RNF40-212ENST00000602784 MERTKQ12866 999 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SELENBP1Q13228 472 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 DUSP7Q16829 419 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 ACSF3Q4G176 576 aaPredicted RBP12.51□□□□□ -0.41
RNF40-212ENST00000602784 SAMD4BQ5PRF9 694 aaKnown RBP12.51□□□□□ -0.41
RNF40-212ENST00000602784 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 MYO7BQ6PIF6 2116 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 B3GNT6Q6ZMB0 384 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 PLEKHM3Q6ZWE6 761 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 ADGRE4PQ86SQ3 457 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 LILRA2Q8N149 483 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 KCTD14Q9BQ13 255 aaPredicted RBP12.51□□□□□ -0.41
RNF40-212ENST00000602784 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 C1orf21Q9H246 121 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 ALKBH4Q9NXW9 302 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 ADA2Q9NZK5 511 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SH3BGRL2Q9UJC5 107 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
RNF40-212ENST00000602784 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 H0Y3Z8 333 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 AGFG2O95081 481 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 GKN3PP0CG01 181 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 PRG2P13727 222 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 HSD17B1P14061 328 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 CD247P20963 164 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 HTR1EP28566 365 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 CLK1P49759 484 aaKnown RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 POLR2HP52434 150 aaKnown RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 ZNF136P52737 540 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 SUCLG1P53597 346 aaKnown RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 CLDN20P56880 219 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 MXRA7P84157 204 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 SRYQ05066 204 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 FXNQ16595 210 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 RPTNQ6XPR3 784 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 C3P1Q6ZMU1 363 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 ESPNLQ6ZVH7 1005 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 GGNQ86UU5 652 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 LACC1Q8IV20 430 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 DEFB107AQ8IZN7 70 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 ARHGAP24Q8N264 748 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 SMYD1Q8NB12 490 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 RBM15BQ8NDT2 890 aaKnown RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 GPR32P1Q8NGA4 272 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 SLC26A7Q8TE54 656 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 TUBA1CQ9BQE3 449 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 TTYH2Q9BSA4 534 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 PAQR5Q9NXK6 330 aaPredicted RBP12.5□□□□□ -0.41
RNF40-212ENST00000602784 CD300AQ9UGN4 299 aa12.5□□□□□ -0.41
RNF40-212ENST00000602784 BAG5Q9UL15 447 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms