RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SNPHO15079 494 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 TNFSF13O75888 250 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 RCBTB2O95199 551 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 CBX7O95931 251 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 ACTL6AO96019 429 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 IFNA14P01570 189 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 PORP16435 677 aaPredicted RBP12.37□□□□□ -0.43
IRF3-225ENST00000600022 PCGF2P35227 344 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 PTDSS1P48651 473 aaKnown RBP12.37□□□□□ -0.43
IRF3-225ENST00000600022 GFRA1P56159 465 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 NRG3P56975 720 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 MRPS35P82673 323 aaKnown RBP12.37□□□□□ -0.43
IRF3-225ENST00000600022 CHRNB3Q05901 458 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 TP53BP2Q13625 1128 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 GNA13Q14344 377 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
IRF3-225ENST00000600022 SAXO2Q658L1 398 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 NUP54Q7Z3B4 507 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 OR5AK3PQ8NH89 298 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 CTHRC1Q96CG8 243 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 SLC35G5Q96KT7 338 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 DACH2Q96NX9 599 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 WFIKKN1Q96NZ8 548 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 PIGQQ9BRB3 760 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 ARMC1Q9NVT9 282 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 NTMQ9P121 344 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
IRF3-225ENST00000600022 ANGPT4Q9Y264 503 aa12.37□□□□□ -0.43
IRF3-225ENST00000600022 CSPG4Q6UVK1 2322 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 A8MXE2 369 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 H0YC42 278 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 PLOD2O00469 737 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 EMC8O43402 210 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 GCKP35557 465 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 MC3RP41968 323 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 KHKP50053 298 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 EMDP50402 254 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 LHX2P50458 406 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 GZMMP51124 257 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 MVDP53602 400 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
IRF3-225ENST00000600022 DSTNP60981 165 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 MAP4K2Q12851 820 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 TRIP10Q15642 601 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 ZNF628Q5EBL2 1059 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 C6orf120Q7Z4R8 191 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 RNF130Q86XS8 419 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 CCDC116Q8IYX3 515 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 OR2L13Q8N349 312 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 C17orf47Q8NEP4 570 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 OR7G1Q8NGA0 311 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 OR52R1Q8NGF1 315 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 LCORQ96JN0 433 aaPredicted RBP12.36□□□□□ -0.43
IRF3-225ENST00000600022 OSBPL11Q9BXB4 747 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 OR2B2Q9GZK3 357 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 TMEM38AQ9H6F2 299 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 ZCCHC3Q9NUD5 404 aaKnown RBP12.36□□□□□ -0.43
IRF3-225ENST00000600022 ADPRHL2Q9NX46 363 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 CLCF1Q9UBD9 225 aa12.36□□□□□ -0.43
IRF3-225ENST00000600022 ARID1AO14497 2285 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 A0A087WV62 115 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 DEFB108AA8MXU0 73 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 H3BNX3 289 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 SMAD7O15105 426 aaKnown RBP12.35□□□□□ -0.43
IRF3-225ENST00000600022 ZIC3O60481 467 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 PLOD3O60568 738 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 CBR3O75828 277 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 C1QCP02747 245 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 RAP2AP10114 183 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 BMP2P12643 396 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 NAGAP17050 411 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 FASP25445 335 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 TMED10P49755 219 aaKnown RBP12.35□□□□□ -0.43
IRF3-225ENST00000600022 CLDN15P56746 228 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 CLDN18P56856 261 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 PLCXD2Q0VAA5 305 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 SF3B4Q15427 424 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■■ 30.8
IRF3-225ENST00000600022 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
IRF3-225ENST00000600022 SLC30A6Q6NXT4 461 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 TMEM107Q6UX40 140 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 C10orf111Q8N326 155 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 METTL25Q8N6Q8 603 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 CANT1Q8WVQ1 401 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 LZICQ8WZA0 190 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 WNT2BQ93097 391 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 TMBIM1Q969X1 311 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 STARD4Q96DR4 205 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 ELP4Q96EB1 424 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 TACO1Q9BSH4 297 aaKnown RBP12.35□□□□□ -0.43
IRF3-225ENST00000600022 SFXN3Q9BWM7 321 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 MAGIXQ9H6Y5 334 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 GPATCH2Q9NW75 528 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 BEX4Q9NWD9 120 aaPredicted RBP12.35□□□□□ -0.43
IRF3-225ENST00000600022 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 TAS2R10Q9NYW0 307 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 KLRF1Q9NZS2 232 aa12.35□□□□□ -0.43
IRF3-225ENST00000600022 BAG5Q9UL15 447 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms