RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
TRIM47-206ENST00000592942 ADGRG4Q8IZF6 3080 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 FAM47E-STBD1D6RA91 191 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 SEC14L5O43304 696 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CCDC22O60826 627 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 NPPAP01160 153 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 THBS1P07996 1170 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 ETS2P15036 469 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 PGCP20142 388 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 RYKP34925 604 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CCR4P51679 360 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 FOXF2Q12947 444 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CYLC2Q14093 348 aaPredicted RBP13.76□□□□□ -0.21
TRIM47-206ENST00000592942 GNA13Q14344 377 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
TRIM47-206ENST00000592942 COMTD1Q86VU5 262 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 GRAMD2AQ8IUY3 354 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 MEIOBQ8N635 442 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 TMCO5AQ8N6Q1 288 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 ANKS4BQ8N8V4 417 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 ACBD4Q8NC06 268 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 RP9Q8TA86 221 aaKnown RBP13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 ST8SIA1Q92185 356 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 SMPDL3BQ92485 455 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 ZNF443Q9Y2A4 671 aaPredicted RBP13.76□□□□□ -0.21
TRIM47-206ENST00000592942 ARL2BPQ9Y2Y0 163 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CAPN7Q9Y6W3 813 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 CACNA1CQ13936 2221 aa13.76□□□□□ -0.21
TRIM47-206ENST00000592942 NKX2-6A6NCS4 301 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 HSPB2A8KAH6 182 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 BBIP1A8MTZ0 92 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 PRSS44E7EML9 344 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 MRASO14807 208 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 TPST1O60507 370 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 IL2RAP01589 272 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 PABPC4LP0CB38 370 aaKnown RBP13.75□□□□□ -0.21
TRIM47-206ENST00000592942 GKN3PP0CG01 181 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 COX4I1P13073 169 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 PRG2P13727 222 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 ELK4P28324 431 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 SLC6A8P48029 635 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 PCBP3P57721 371 aaKnown RBP13.75□□□□□ -0.21
TRIM47-206ENST00000592942 EEFSECP57772 596 aaKnown RBP13.75□□□□□ -0.21
TRIM47-206ENST00000592942 EPS8Q12929 822 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 SCARB2Q14108 478 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 MAPRE2Q15555 327 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 HSPB2Q16082 182 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 LIN52Q52LA3 116 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 RABL3Q5HYI8 236 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 RNF220Q5VTB9 566 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 REEP3Q6NUK4 255 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 PLEKHM3Q6ZWE6 761 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 CALHM3Q86XJ0 350 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 ADGRG3Q86Y34 549 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 ZZZ3Q8IYH5 903 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 RELL2Q8NC24 303 aaPredicted RBP13.75□□□□□ -0.21
TRIM47-206ENST00000592942 CCDC197Q8NCU1 140 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 OR10A6Q8NH74 314 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 OR10D3Q8NH80 312 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 BBS10Q8TAM1 723 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 SPATA9Q9BWV2 254 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 PINK1Q9BXM7 581 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 ZNF629Q9UEG4 869 aaPredicted RBP13.75□□□□□ -0.21
TRIM47-206ENST00000592942 IFT52Q9Y366 437 aa13.75□□□□□ -0.21
TRIM47-206ENST00000592942 HCFC1P51610 2035 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 INTS1Q8N201 2190 aaKnown RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 TMEM247A6NEH6 219 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 FAAHO00519 579 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 EIF1AYO14602 144 aaKnown RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 TNFSF11O14788 317 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 AQP8O94778 261 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 CTSSP25774 331 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 IDH2P48735 452 aaKnown RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 AGFG1P52594 562 aaKnown RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 GABPB1Q06547 395 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 TMEM176BQ3YBM2 270 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 GLIPR1L2Q4G1C9 344 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 ESPNLQ6ZVH7 1005 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 OR2V1Q8NHB1 315 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 FNDC9Q8TBE3 224 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 OSTF1Q92882 214 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 RCN3Q96D15 328 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 TM9SF2Q99805 663 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 WFDC6Q9BQY6 131 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 GPATCH1Q9BRR8 931 aaKnown RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 ADAM19Q9H013 955 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 COQ10BQ9H8M1 238 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 NPDC1Q9NQX5 325 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-206ENST00000592942 STOML1Q9UBI4 398 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 ZNF232Q9UNY5 417 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 ZNF175Q9Y473 711 aa13.74□□□□□ -0.21
TRIM47-206ENST00000592942 CFAP73A6NFT4 308 aa13.73□□□□□ -0.21
TRIM47-206ENST00000592942 SLC22A20A6NK97 555 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms