RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 BORCS8Q96FH0 119 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 GPATCH2Q9NW75 528 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 ASIC5Q9NY37 505 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 KLRF1Q9NZS2 232 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 TCRBV5S2A0A599 114 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 SEC14L5O43304 696 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 TRA2BP62995 288 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 SLC5A12Q1EHB4 618 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 ACTBL2Q562R1 376 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 KCNIP4Q6PIL6 250 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 FBXL4Q9UKA2 621 aa13.71□□□□□ -0.21
SMARCA4-214ENST00000589677 TMEM129A0AVI4 362 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 ANTXRLA6NF34 631 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 FBXO24O75426 580 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 NDUFA6P56556 154 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 PER3P56645 1201 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 HIST2H3PS2Q5TEC6 136 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 RTL6Q6ICC9 239 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 TANGO2Q6ICL3 276 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 DLEU7Q6UYE1 221 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 KANSL1Q7Z3B3 1105 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF695Q8IW36 515 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 CLRN3Q8NCR9 226 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 SDR9C7Q8NEX9 313 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 OR52H1Q8NGJ2 320 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 UBTD2Q8WUN7 234 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 NECTIN4Q96NY8 510 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 GABARAPL3Q9BY60 117 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 NDUFB11Q9NX14 153 aa13.71□□□□□ -0.22
SMARCA4-214ENST00000589677 A8MXE2 369 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 K7EPK0 472 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SLC10A3P09131 477 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 HOXC12P31275 282 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 HBA1P69905 142 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CTSL3PQ5NE16 218 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CD163Q86VB7 1156 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 FAM71E2Q8N5Q1 922 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SLC30A7Q8NEW0 376 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 EGLN3Q9H6Z9 239 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 PRELID3BQ9Y3B1 194 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 OR1A2Q9Y585 309 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 WIF1Q9Y5W5 379 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 PUS1Q9Y606 427 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 I6L893 689 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 DPM1O60762 260 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 GPX5O75715 221 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 GJB5O95377 273 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 GPX2P18283 190 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 HTR1FP30939 366 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 RAB4BP61018 213 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 OC90Q02509 493 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 LCTLQ6UWM7 567 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SH2D5Q6ZV89 423 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 PRSS42Q7Z5A4 293 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CDRT4Q8N9R6 151 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 GATSQ8NAP1 163 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 NAXEQ8NCW5 288 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 RRNAD1Q96FB5 475 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 BTF3L4Q96K17 158 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 BMFQ96LC9 184 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SMIM3Q9BZL3 60 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 C2orf42Q9NWW7 574 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 ICKQ9UPZ9 632 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SLC45A1Q9Y2W3 748 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 A0A0A6YYJ9 748 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 FUT1P19526 365 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 NR0B1P51843 470 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF322Q6U7Q0 402 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 TEPSINQ96N21 525 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 DOK1Q99704 481 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 TGIF2Q9GZN2 237 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 PLSCR3Q9NRY6 295 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 FAM183AA6NL82 134 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 TO15178 435 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 AKR7A2O43488 359 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 MPIG6BO95866 241 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 LIPCP11150 499 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 IFNGR1P15260 489 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 TNFRSF17Q02223 184 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CHRNEQ04844 493 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CTF1Q16619 201 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 DEFB134Q4QY38 66 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 SOHLH1Q5JUK2 328 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CLLU1Q5K131 121 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 RIMKLAQ8IXN7 391 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 RNF113BQ8IZP6 322 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 C14orf79Q96F83 325 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF578Q96N58 590 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 FAM83CQ9BQN1 747 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF442Q9H7R0 627 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 CLEC2DQ9UHP7 191 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 B3GALT1Q9Y5Z6 326 aa13.7□□□□□ -0.22
SMARCA4-214ENST00000589677 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
SMARCA4-214ENST00000589677 PNMTP11086 282 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms