RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SLC38A1Q9H2H9 487 aa22.3■■□□□ 1.16
CDC42EP4-205ENST00000580315 RNF122Q9H9V4 155 aa22.3■■□□□ 1.16
CDC42EP4-205ENST00000580315 CALML5Q9NZT1 146 aa22.3■■□□□ 1.16
CDC42EP4-205ENST00000580315 DCTN4Q9UJW0 460 aa22.3■■□□□ 1.16
CDC42EP4-205ENST00000580315 A0A096LPI6 279 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 A6NNC1 897 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 TNFSF11O14788 317 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 CHRM4P08173 479 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 NCF2P19878 526 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 DNASE1P24855 282 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 SFTPDP35247 375 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 PGM1P36871 562 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 MVDP53602 400 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 DSTNP60981 165 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 KCNJ10P78508 379 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 CTU2Q2VPK5 515 aaKnown RBP22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 AGKQ53H12 422 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 SLC25A53Q5H9E4 307 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 CDC20BQ86Y33 519 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 FUNDC1Q8IVP5 155 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 CMIPQ8IY22 773 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 ZG16BQ96DA0 208 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 AURKBQ96GD4 344 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 PAIP1Q9H074 479 aaKnown RBP22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 TIGARQ9NQ88 270 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 EDARQ9UNE0 448 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 PCDHB14Q9Y5E9 798 aa22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 FLNAP21333 2647 aaKnown RBP22.29■■□□□ 1.16
CDC42EP4-205ENST00000580315 A0A0J9YW62 118 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 AGAP5A6NIR3 686 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 CXCL13O43927 109 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 DNAJA2O60884 412 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 TNFSF13O75888 250 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 ETFAP13804 333 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 IL11P20809 199 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 FOXD4Q12950 439 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 SELENBP1Q13228 472 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 LUZP2Q86TE4 346 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 FAM71CQ8NEG0 241 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 FAM222BQ8WU58 562 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 RBM24Q9BX46 236 aaKnown RBP22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 QRSL1Q9H0R6 528 aaKnown RBP22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 EXOSC3Q9NQT5 275 aaKnown RBP22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 KIAA1549Q9HCM3 1950 aa22.28■■□□□ 1.16
CDC42EP4-205ENST00000580315 A0A0G2JND7 137 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 ETV2O00321 342 aaPredicted RBP22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 NTN1O95631 604 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 DBIP07108 87 aaKnown RBP22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 IL7RP16871 459 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 SLC6A8P48029 635 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 CRISP3P54108 245 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 CARD18P57730 90 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 HMGN2P46Q86SG4 172 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 PEX5LQ8IYB4 626 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 ZNF563Q8TA94 476 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 WDR60Q8WVS4 1066 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 OSTF1Q92882 214 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 REXO5Q96IC2 774 aaKnown RBP22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 ALPK1Q96QP1 1244 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 CACYBPQ9HB71 228 aaKnown RBP22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 DLL4Q9NR61 685 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 SERINC1Q9NRX5 453 aa22.27■■□□□ 1.16
CDC42EP4-205ENST00000580315 ABCA2Q9BZC7 2435 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 UQCRHLA0A096LP55 91 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 CLIC1O00299 241 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 MSTNO14793 375 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 SMNDC1O75940 238 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 PLGP00747 810 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 BCHEP06276 602 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 TROVE2P10155 538 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 SESN3P58005 492 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 SIRPAP78324 504 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 SORDQ00796 357 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 FADDQ13158 208 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 TMEM176BQ3YBM2 270 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 LRIF1Q5T3J3 769 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 ATP6V1C2Q8NEY4 427 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 STARD4Q96DR4 205 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 GSX1Q9H4S2 264 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 MED4Q9NPJ6 270 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 ACER3Q9NUN7 267 aa22.26■■□□□ 1.15
CDC42EP4-205ENST00000580315 EFNA2O43921 213 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 AQP8O94778 261 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 TFPTP0C1Z6 253 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 PABPC4LP0CB38 370 aaKnown RBP22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 PPIBP23284 216 aaKnown RBP22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 SLC7A1P30825 629 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 RYKP34925 604 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 MERTKQ12866 999 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 RGNQ15493 299 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 GTF2IRD2BQ6EKJ0 949 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 C3orf33Q6P1S2 294 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 FAM214BQ7L5A3 538 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 GTF2IRD2Q86UP8 949 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 SLC38A5Q8WUX1 472 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 CPNE4Q96A23 557 aaPredicted RBP22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 MBD6Q96DN6 1003 aa22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 GMPPAQ96IJ6 420 aaPredicted RBP22.25■■□□□ 1.15
CDC42EP4-205ENST00000580315 GLRX2Q9NS18 164 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms