RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PSD2Q9BQI7 771 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 GATA5Q9BWX5 397 aaPredicted RBP15.84■□□□□ 0.13
MKS1-209ENST00000580127 NMUR2Q9GZQ4 415 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 LAT2Q9GZY6 243 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 TUBB1Q9H4B7 451 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 COQ10BQ9H8M1 238 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 SIRT3Q9NTG7 399 aaPredicted RBP15.84■□□□□ 0.13
MKS1-209ENST00000580127 CDC42EP3Q9UKI2 254 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 ALPK2Q86TB3 2170 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 FBN1P35555 2871 aaKnown RBP15.84■□□□□ 0.13
MKS1-209ENST00000580127 CR1P17927 2039 aa15.84■□□□□ 0.13
MKS1-209ENST00000580127 IGHV3-15A0A0B4J1V0 119 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 A0A1W2PNR3 127 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 CCT8L1PA6NM43 557 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 C9JVG2 144 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 RAMP1O60894 148 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 CYP7B1O75881 506 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 PGM3O95394 542 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 CD8AP01732 235 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 FAM153BP0C7A2 387 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 LAMP1P11279 417 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 PGCP20142 388 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 C21orf58P58505 322 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 FAM153CQ494X1 144 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 FBXW9Q5XUX1 488 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 OR7E24Q6IFN5 339 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 SLC22A25Q6T423 547 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 DNM1P46Q6ZS02 220 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 TMPPEQ6ZT21 453 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 MTDHQ86UE4 582 aaKnown RBP15.83■□□□□ 0.12
MKS1-209ENST00000580127 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
MKS1-209ENST00000580127 KIF18AQ8NI77 898 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 SLC25A43Q8WUT9 341 aaPredicted RBP15.83■□□□□ 0.12
MKS1-209ENST00000580127 TWIST2Q8WVJ9 160 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 ZNF775Q96BV0 537 aaPredicted RBP15.83■□□□□ 0.12
MKS1-209ENST00000580127 DHRS9Q9BPW9 319 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 THUMPD3Q9BV44 507 aaKnown RBP15.83■□□□□ 0.12
MKS1-209ENST00000580127 CXorf36Q9H7Y0 433 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 PRSS50Q9UI38 385 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 PCDHGB4Q9UN71 923 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 B3GALT5Q9Y2C3 310 aa15.83■□□□□ 0.12
MKS1-209ENST00000580127 HEATR1Q9H583 2144 aaKnown RBP15.83■□□□□ 0.12
MKS1-209ENST00000580127 DNHD1Q96M86 4753 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 NPIPA5A0A0B4J1W7 369 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 SERINC4A6NH21 518 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 OR5H1A6NKK0 313 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 SHISA9B4DS77 424 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 NPIPA7E9PJI5 369 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 ANKRD28O15084 1053 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 OIP5O43482 229 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 NPHS1O60500 1241 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 PEX11AO75192 247 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 STX11O75558 287 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 THBS1P07996 1170 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 DHRS4L1P0CG22 281 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 NPIPA8P0DM63 369 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 TFPIP10646 304 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 DIO1P49895 249 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 CHRNB3Q05901 458 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 MERTKQ12866 999 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 PDK3Q15120 406 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 EIF3MQ7L2H7 374 aaKnown RBP15.82■□□□□ 0.12
MKS1-209ENST00000580127 UBLCP1Q8WVY7 318 aaPredicted RBP15.82■□□□□ 0.12
MKS1-209ENST00000580127 APH1AQ96BI3 265 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 COQ8BQ96D53 544 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 SDF2Q99470 211 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 KLHDC3Q9BQ90 382 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 BEX2Q9BXY8 128 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 TXLNGYQ9BZA5 131 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 BHLHE41Q9C0J9 482 aaPredicted RBP15.82■□□□□ 0.12
MKS1-209ENST00000580127 CBLN4Q9NTU7 201 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 EXD2Q9NVH0 621 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 GPATCH2Q9NW75 528 aa15.82■□□□□ 0.12
MKS1-209ENST00000580127 GDF2Q9UK05 429 aaPredicted RBP15.82■□□□□ 0.12
MKS1-209ENST00000580127 NOSIPQ9Y314 301 aaKnown RBP15.82■□□□□ 0.12
MKS1-209ENST00000580127 FAM234BA2RU67 622 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 SMIM23A6NLE4 172 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 NPIPB9F8W1W9 429 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 ETV2O00321 342 aaPredicted RBP15.81■□□□□ 0.12
MKS1-209ENST00000580127 PIP5K1BO14986 540 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 SMAD9O15198 467 aaKnown RBP15.81■□□□□ 0.12
MKS1-209ENST00000580127 C6orf47O95873 294 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 AGR2O95994 175 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 CSTAP01040 98 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 FAM157CP0CG43 387 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 IGHV1-2P23083 117 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 TTKP33981 857 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 APOBEC1P41238 236 aaKnown RBP15.81■□□□□ 0.12
MKS1-209ENST00000580127 MAD2L1Q13257 205 aaPredicted RBP15.81■□□□□ 0.12
MKS1-209ENST00000580127 GPR68Q15743 365 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.81■□□□□ 0.12
MKS1-209ENST00000580127 C1QTNF12Q5T7M4 302 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 ZNF433Q8N7K0 673 aaPredicted RBP15.81■□□□□ 0.12
MKS1-209ENST00000580127 EIF1ADQ8N9N8 165 aaKnown RBP15.81■□□□□ 0.12
MKS1-209ENST00000580127 OIT3Q8WWZ8 545 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 OR7D2Q96RA2 312 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 TNFRSF13CQ96RJ3 184 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 KCNK17Q96T54 332 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 RHOXF2Q9BQY4 288 aa15.81■□□□□ 0.12
MKS1-209ENST00000580127 ANKZF1Q9H8Y5 726 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms