RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 MAOAP21397 527 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 BCKDHBP21953 392 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 HTR1FP30939 366 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SLC1A3P43003 542 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 TGM4P49221 684 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 BCAP31P51572 246 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CDH11P55287 796 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 WNT4P56705 351 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 STARD6P59095 220 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 RPS25P62851 125 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CFHR1Q03591 330 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 FGFBP1Q14512 234 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZNF267Q14586 743 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 UBXN2BQ14CS0 331 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CCDC85BQ15834 202 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 DEFB133Q30KQ1 61 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LRIT3Q3SXY7 679 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 AMZ1Q400G9 498 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 NKAIN2Q5VXU1 208 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 NXNL2Q5VZ03 156 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 VASNQ6EMK4 673 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 NIPAL1Q6NVV3 410 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZNF613Q6PF04 617 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CD200R1LQ6Q8B3 271 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 B3GLCTQ6Y288 498 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 HSDL2Q6YN16 418 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 RRM2BQ7LG56 351 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZNF554Q86TJ5 538 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LHFPL3Q86UP9 236 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LYSMD2Q8IV50 215 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CPOQ8IVL8 374 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LNX2Q8N448 690 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PARP16Q8N5Y8 322 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 METTL27Q8N6F8 245 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZNF615Q8N8J6 731 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 FAM83FQ8NEG4 500 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 OR2T33Q8NG76 320 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 OR6C4Q8NGE1 309 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SNRNP27Q8WVK2 155 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 RIT1Q92963 219 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 KISS1RQ969F8 398 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PPP1R14BQ96C90 147 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 HS6ST2Q96MM7 605 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PTCHD1Q96NR3 888 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 DCLRE1CQ96SD1 692 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 NELL2Q99435 816 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SLC38A3Q99624 504 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 NEURL2Q9BR09 285 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZNF559Q9BR84 538 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 JAM3Q9BX67 310 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ASPNQ9BXN1 380 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 C6orf62Q9GZU0 229 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 RAB33BQ9H082 229 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PCED1AQ9H1Q7 454 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CLEC4MQ9H2X3 399 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SIAEQ9HAT2 523 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PRTFDC1Q9NRG1 225 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LANCL2Q9NS86 450 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 TXNL4BQ9NX01 149 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 EPHA6Q9UF33 1036 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 DAPK2Q9UIK4 370 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CFL2Q9Y281 166 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 EXOSC1Q9Y3B2 195 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SPIN1Q9Y657 262 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CSNK1G3Q9Y6M4 447 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 RNF215Q9Y6U7 377 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 TRIOO75962 3097 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 IRGMA1A4Y4 181 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZC3H12DA2A288 527 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 BLACEA4D250 179 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CCDC182A6NF36 153 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 TLCD2A6NGC4 264 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 FAM183AA6NL82 134 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ZNF749O43361 778 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CHP2O43745 196 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PRKNO60260 465 aaPredicted RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SDC3O75056 442 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 UPK1BO75841 260 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PIAS2O75928 621 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SOX30O94993 753 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 HMGN1P05114 100 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PSMA1P25786 263 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CD1CP29017 333 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 TNFSF8P32971 234 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 GALNSP34059 522 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CSNK1EP49674 416 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 HSD17B7P56937 341 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 CSTF1Q05048 431 aaKnown RBP4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 ACSM1Q08AH1 577 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 STX4Q12846 297 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 SLC13A2Q13183 592 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 KCNAB1Q14722 419 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 TMEM44Q2T9K0 475 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 NDUFAF6Q330K2 333 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 PLK5Q496M5 336 aa4.86□□□□□ -1.63
ERVFRD-3-201ENST00000578561 C14orf28Q4W4Y0 310 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms