RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CLRN3Q8NCR9 226 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ZNF461Q8TAF7 563 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 STOML3Q8TAV4 291 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 CXorf40AQ8TE69 158 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 GPR137Q96N19 417 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 HRH4Q9H3N8 390 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ASB6Q9NWX5 421 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ABT1Q9ULW3 272 aaKnown RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 A4GNTQ9UNA3 340 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 BRWD1Q9NSI6 2320 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 F5P12259 2224 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 MEIKINA0A087WXM9 373 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 PLPP1O14494 284 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 CCL16O15467 120 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 AMY2AP04746 511 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ZP3P21754 424 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 DDX6P26196 483 aaKnown RBP eCLIP10.16□□□□□ -0.78
PALB2-206ENST00000568219 CCND3P30281 292 aaPredicted RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 PRKXP51817 358 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 FBXW4P57775 412 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 GXYLT1Q4G148 440 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 PAN3Q58A45 887 aaKnown RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 CMIPQ8IY22 773 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 LRRC56Q8IYG6 542 aaPredicted RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 CMTM4Q8IZR5 234 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 GLIPR2Q9H4G4 154 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 HRASLSQ9HDD0 168 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ZNF175Q9Y473 711 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ATP1B1P05026 303 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 C6P13671 934 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ITPKBP27987 946 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 HTR1FP30939 366 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 CCR9P51686 369 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 SIM1P81133 766 aaPredicted RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 SQSTM1Q13501 440 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 GAS6Q14393 721 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 RBM39Q14498 530 aaKnown RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 TSSK4Q6SA08 328 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 JAZF1Q86VZ6 243 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 CCDC107Q8WV48 283 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 WNT2BQ93097 391 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ZNF689Q96CS4 500 aaPredicted RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 HS6ST2Q96MM7 605 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 DNAH12Q6ZR08 3092 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 RP1P56715 2156 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 GAPDHSO14556 408 aaPredicted RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 AKR1C4P17516 323 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 ATF1P18846 271 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 CD163Q86VB7 1156 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 SDR16C5Q8N3Y7 309 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 C17orf47Q8NEP4 570 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
PALB2-206ENST00000568219 SLC6A7Q99884 636 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 KATNBL1Q9H079 304 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 DNTTIP1Q9H147 329 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 GHITMQ9H3K2 345 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 FN3KQ9H479 309 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 IFT22Q9H7X7 185 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 NTMQ9P121 344 aa10.16□□□□□ -0.78
PALB2-206ENST00000568219 TBC1D3BA6NDS4 549 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 H3BNC9 293 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 SYN1P17600 705 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 UBE2IP63279 158 aaKnown RBP10.15□□□□□ -0.78
PALB2-206ENST00000568219 CAP1Q01518 475 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.78
PALB2-206ENST00000568219 LINC00303Q3SY05 128 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 PLA1AQ53H76 456 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 PDSS1Q5T2R2 415 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 OR10R2Q8NGX6 335 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 TM4SF18Q96CE8 201 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 OR1F2PQ96R84 312 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 UPB1Q9UBR1 384 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 CAMK2AQ9UQM7 478 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 SPACA6W5XKT8 324 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 SEC16AO15027 2179 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 DUXAA6NLW8 204 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 TTLL8A6PVC2 850 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 FZD6O60353 706 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 ANKRD34CP0C6C1 535 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 FKBP1BP68106 108 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 ZNF273Q14593 569 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 LTB4RQ15722 352 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 FAM69AQ5T7M9 428 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 TMCO2Q7Z6W1 182 aaPredicted RBP10.15□□□□□ -0.78
PALB2-206ENST00000568219 OR6V1Q8N148 313 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 ANKRD53Q8N9V6 530 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 OR56A1Q8NGH5 318 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 OR52N1Q8NH53 320 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 NSMAFQ92636 917 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 ADAT1Q9BUB4 502 aaKnown RBP10.15□□□□□ -0.78
PALB2-206ENST00000568219 MRPS30Q9NP92 439 aaKnown RBP10.15□□□□□ -0.78
PALB2-206ENST00000568219 GPR160Q9UJ42 338 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 FBXL4Q9UKA2 621 aa10.15□□□□□ -0.78
PALB2-206ENST00000568219 GLTPD2A6NH11 291 aa10.15□□□□□ -0.79
PALB2-206ENST00000568219 CD160O95971 181 aa10.15□□□□□ -0.79
PALB2-206ENST00000568219 CHRM4P08173 479 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms