RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 OR4D9Q8NGE8 314 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 EFHD2Q96C19 240 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 COPS8Q99627 209 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CCDC77Q9BR77 488 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 SLC35A5Q9BS91 424 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 TSSK1BQ9BXA7 367 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 ROPN1BQ9BZX4 212 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 VPS37BQ9H9H4 285 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CUTCQ9NTM9 273 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CLEC5AQ9NY25 188 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 SUN2Q9UH99 717 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 RIMS3Q9UJD0 308 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 POLA1P09884 1462 aaPredicted RBP3.91□□□□□ -1.78
CNOT1-209ENST00000566240 PRXQ9BXM0 1461 aa3.91□□□□□ -1.78
CNOT1-209ENST00000566240 CFAP43Q8NDM7 1665 aa3.9□□□□□ -1.78
CNOT1-209ENST00000566240 ANKRD30BQ9BXX2 1392 aa3.9□□□□□ -1.78
CNOT1-209ENST00000566240 PCNX3Q9H6A9 2034 aa3.9□□□□□ -1.78
CNOT1-209ENST00000566240 IGKV3D-15A0A087WSY6 115 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 LOC100131303A0A0U1RQF7 123 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 A0A1B0GVL5 298 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 B4DXG7 233 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 F5H6K3 240 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 POLR2DO15514 142 aaKnown RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PHF1O43189 567 aaPredicted RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 CIB2O75838 187 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PGK1P00558 417 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 SLC2A3P11169 496 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 TOP1P11387 765 aaKnown RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PGAM2P15259 253 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 GCAP28676 217 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 MAGEA9P43362 315 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 EFNA3P52797 238 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 CDH4P55283 916 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 MRPS11P82912 194 aaKnown RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 ZFP36L1Q07352 338 aaKnown RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 KLRC3Q07444 240 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 RUNX3Q13761 415 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 SERTAD2Q14140 314 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 FCN2Q15485 313 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 ATL3Q6DD88 541 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 STXBP4Q6ZWJ1 553 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 DHDDSQ86SQ9 333 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 POM121L12Q8N7R1 296 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 ATP6V0D2Q8N8Y2 350 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 OR9K2Q8NGE7 335 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 CCDC26Q8TAB7 109 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PSMG2Q969U7 264 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 FAF2Q96CS3 445 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 C10orf35Q96D05 121 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PLIN2Q99541 437 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 ANP32EQ9BTT0 268 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 GFRA4Q9GZZ7 299 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 NAT10Q9H0A0 1025 aaKnown RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 SMYD3Q9H7B4 428 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 VCPKMTQ9H867 229 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 NANSQ9NR45 359 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 DPM3Q9P2X0 92 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 SPRR3Q9UBC9 169 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 ANGPTL2Q9UKU9 493 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PRPF19Q9UMS4 504 aaKnown RBP3.9□□□□□ -1.79
CNOT1-209ENST00000566240 ERVW-1Q9UQF0 538 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 PPIAL4AQ9Y536 164 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 NESP48681 1621 aa3.9□□□□□ -1.79
CNOT1-209ENST00000566240 FHAD1B1AJZ9 1412 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 ZNF716A6NP11 495 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 SGK1O00141 431 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 LATO43561 262 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 PRKAB2O43741 272 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 ERLIN1O75477 346 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 GPX5O75715 221 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 CABYRO75952 493 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 DIRAS1O95057 198 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 IGHG4P01861 327 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 UQCRFS1P1P0C7P4 283 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 ZNF735P0CB33 412 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 SLC35E2P0CK97 266 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 CAPN2P17655 700 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 HMGB2P26583 209 aaKnown RBP3.89□□□□□ -1.79
CNOT1-209ENST00000566240 ADORA2BP29275 332 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 IL2RGP31785 369 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 YWHABP31946 246 aaKnown RBP3.89□□□□□ -1.79
CNOT1-209ENST00000566240 XCR1P46094 333 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 RPL29P47914 159 aaKnown RBP3.89□□□□□ -1.79
CNOT1-209ENST00000566240 FNTAP49354 379 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 STARP49675 285 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 ATP1B3P54709 279 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 RPL32P62910 135 aaKnown RBP3.89□□□□□ -1.79
CNOT1-209ENST00000566240 CCNA1P78396 465 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 KLRB1Q12918 225 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 CUL2Q13617 745 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 IDI1Q13907 227 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 SSX2Q16385 188 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 IMMTQ16891 758 aaKnown RBP3.89□□□□□ -1.79
CNOT1-209ENST00000566240 TRIM16LQ309B1 348 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 GLYR1Q49A26 553 aaPredicted RBP3.89□□□□□ -1.79
CNOT1-209ENST00000566240 PRAMEF5Q5TYX0 476 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 PRAMEF6Q5VXH4 476 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 LIPNQ5VXI9 398 aa3.89□□□□□ -1.79
CNOT1-209ENST00000566240 OR2A2Q6IF42 318 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms