RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 HS6ST2Q96MM7 605 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 MUS81Q96NY9 551 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 BARD1Q99728 777 aaKnown RBP8.93□□□□□ -0.98
UBFD1-203ENST00000564106 FUZQ9BT04 418 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 RSPO3Q9BXY4 272 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-203ENST00000564106 PRRG3Q9BZD7 231 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 UCK2Q9BZX2 261 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 NXF5Q9H1B4 397 aaKnown RBP8.93□□□□□ -0.98
UBFD1-203ENST00000564106 EXOSC3Q9NQT5 275 aaKnown RBP8.93□□□□□ -0.98
UBFD1-203ENST00000564106 RLIMQ9NVW2 624 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 FBXO34Q9NWN3 711 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 TUBA8Q9NY65 449 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-203ENST00000564106 SELENONQ9NZV5 590 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 NDRG4Q9ULP0 352 aaKnown RBP8.93□□□□□ -0.98
UBFD1-203ENST00000564106 HS3ST3B1Q9Y662 390 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 EXPH5Q8NEV8 1989 aa8.93□□□□□ -0.98
UBFD1-203ENST00000564106 NOTCH2Q04721 2471 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 A0A087WXM4 84 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 LOC102723996A0A087X1L8 192 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 HTR3EA5X5Y0 456 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CHP2O43745 196 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CLPTM1O96005 669 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 IGKV1D-16P01601 117 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 UBL4AP11441 157 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 OSMP13725 252 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 NAGAP17050 411 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 TBXA2RP21731 343 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 RBM34P42696 430 aaKnown RBP8.92□□□□□ -0.98
UBFD1-203ENST00000564106 SLC6A8P48029 635 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CLK3P49761 638 aaKnown RBP8.92□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF136P52737 540 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 GABARAPL2P60520 117 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CDC42P60953 191 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CXCR4P61073 352 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 COPZ1P61923 177 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 TUBA4AP68366 448 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 RNF4P78317 190 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 IL5RAQ01344 420 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 TEKQ02763 1124 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 EXT1Q16394 746 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 NNATQ16517 81 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 EIF2S3LQ2VIR3 472 aaKnown RBP8.92□□□□□ -0.98
UBFD1-203ENST00000564106 KLHL26Q53HC5 615 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 FAAH2Q6GMR7 532 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 C1orf94Q6P1W5 598 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 PGBD2Q6P3X8 592 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 PODNL1Q6PEZ8 512 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 KIRREL2Q6UWL6 708 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF730Q6ZMV8 503 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 HMGN2P46Q86SG4 172 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 COMTD1Q86VU5 262 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 MISPQ8IVT2 679 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CDK20Q8IZL9 346 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 GALNT16Q8N428 558 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 FAM26EQ8N5C1 309 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF441Q8N8Z8 693 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 APCDD1LQ8NCL9 501 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 OR4N2Q8NGD1 307 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 GNPDA2Q8TDQ7 276 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 GTPBP3Q969Y2 492 aaKnown RBP8.92□□□□□ -0.98
UBFD1-203ENST00000564106 C8orf44Q96CB5 159 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 SNRNP40Q96DI7 357 aaKnown RBP8.92□□□□□ -0.98
UBFD1-203ENST00000564106 TEX12Q9BXU0 123 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 VCX3AQ9NNX9 186 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 MAN2C1Q9NTJ4 1040 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 ASF1BQ9NVP2 202 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 DNAJB12Q9NXW2 375 aaKnown RBP8.92□□□□□ -0.98
UBFD1-203ENST00000564106 GPR83Q9NYM4 423 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 RPS6KB2Q9UBS0 482 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 KCNE5Q9UJ90 142 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 FBXL4Q9UKA2 621 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 TMEM5Q9Y2B1 443 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CHST2Q9Y4C5 530 aa8.92□□□□□ -0.98
UBFD1-203ENST00000564106 CPAMD8Q8IZJ3 1885 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 POLEQ07864 2286 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SVILO95425 2214 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 A0A087WUU8 490 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 A0A1W2PQ72 361 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 OR6C70A6NIJ9 312 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 FRS3O43559 492 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 MITFO75030 526 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 REM1O75628 298 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 ZFAND5O76080 213 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SEC24DO94855 1032 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 UTS2O95399 124 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 GASTP01350 101 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 CCDC159P0C7I6 412 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 CYP4B1P13584 511 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 COL8A1P27658 744 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 GGT2P36268 569 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 GPR143P51810 404 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 NR0B1P51843 470 aaKnown RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SLC26A5P58743 744 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 ISL1P61371 349 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 RPP38P78345 283 aaKnown RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 ALDH6A1Q02252 535 aaKnown RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 TSPAN31Q12999 210 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SSPNQ14714 243 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 OR1Q1Q15612 314 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 RPL13AP3Q6NVV1 102 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms