RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ACKR1Q16570 336 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 TYW3Q6IPR3 259 aaKnown RBP15.75■□□□□ 0.11
NME3-205ENST00000563854 HEPHL1Q6MZM0 1159 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 OGFOD2Q6N063 350 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 CXorf67Q86X51 503 aaPredicted RBP15.75■□□□□ 0.11
NME3-205ENST00000563854 P3H2Q8IVL5 708 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 ZNF563Q8TA94 476 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 NEURL3Q96EH8 262 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 DNAJA3Q96EY1 480 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 MARK4Q96L34 752 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 PANX1Q96RD7 426 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 ZBTB18Q99592 522 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 SERINC1Q9NRX5 453 aa15.75■□□□□ 0.11
NME3-205ENST00000563854 HDAC3O15379 428 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 BCAS1O75363 584 aaPredicted RBP15.74■□□□□ 0.11
NME3-205ENST00000563854 H6PDO95479 791 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 TFPIP10646 304 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 FPR1P21462 350 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 SLC25A53Q5H9E4 307 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 BEX5Q5H9J7 111 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 TFAP2EQ6VUC0 442 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 DNAJC14Q6Y2X3 702 aaPredicted RBP15.74■□□□□ 0.11
NME3-205ENST00000563854 FRRS1Q6ZNA5 592 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 SPATA19Q7Z5L4 167 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 RNF130Q86XS8 419 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 LRRC34Q8IZ02 419 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 ZNF619Q8N2I2 560 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 PNPT1Q8TCS8 783 aaKnown RBP15.74■□□□□ 0.11
NME3-205ENST00000563854 TMEM234Q8WY98 164 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 ST8SIA1Q92185 356 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 CCDC115Q96NT0 180 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 OR52E6Q96RD3 313 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 INPP5KQ9BT40 448 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 GSX1Q9H4S2 264 aaPredicted RBP15.74■□□□□ 0.11
NME3-205ENST00000563854 THAP1Q9NVV9 213 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 NKIRAS1Q9NYS0 192 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 BTNL2Q9UIR0 455 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 GPR52Q9Y2T5 361 aa15.74■□□□□ 0.11
NME3-205ENST00000563854 CCDC154A6NI56 674 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 CLDN24A6NM45 220 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 TRPC5OSA6NMA1 111 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 GSNP06396 782 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 YES1P07947 543 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 NID1P14543 1247 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 IL32P24001 234 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 IL12AP29459 219 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 HOXC12P31275 282 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 CDKN2CP42773 168 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 MAGOHP61326 146 aaKnown RBP15.73■□□□□ 0.11
NME3-205ENST00000563854 CHRNEQ04844 493 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 Q5PR19 223 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 ATG16L1Q676U5 607 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 ZNF621Q6ZSS3 439 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 PLEKHM3Q6ZWE6 761 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.73■□□□□ 0.11
NME3-205ENST00000563854 SLC43A2Q8N370 569 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 TRIML2Q8N7C3 387 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 PIGTQ969N2 578 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 S100PBPQ96BU1 408 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 ZNF775Q96BV0 537 aaPredicted RBP15.73■□□□□ 0.11
NME3-205ENST00000563854 PERPQ96FX8 193 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 PLPPR2Q96GM1 343 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 TACO1Q9BSH4 297 aaKnown RBP15.73■□□□□ 0.11
NME3-205ENST00000563854 POLE3Q9NRF9 147 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 KLHL9Q9P2J3 617 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 SLC35A3Q9Y2D2 325 aa15.73■□□□□ 0.11
NME3-205ENST00000563854 HMGN4O00479 90 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 SMAD9O15198 467 aaKnown RBP15.72■□□□□ 0.11
NME3-205ENST00000563854 ARHGEF9O43307 516 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 KLF4O43474 513 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ERLIN1O75477 346 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 PGRP06401 933 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 FESP07332 822 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 CCNA2P20248 432 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 PSMB1P20618 241 aaKnown RBP15.72■□□□□ 0.11
NME3-205ENST00000563854 LOXP28300 417 aaPredicted RBP15.72■□□□□ 0.11
NME3-205ENST00000563854 PGM1P36871 562 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 RAC3P60763 192 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 RASGEF1BQ0VAM2 473 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 SYPL1Q16563 259 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ZNF704Q6ZNC4 412 aaPredicted RBP15.72■□□□□ 0.11
NME3-205ENST00000563854 KRTAP1-3Q8IUG1 177 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ARFGAP2Q8N6H7 521 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ANKFN1Q8N957 763 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 STEAP2Q8NFT2 490 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ZG16BQ96DA0 208 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ZNF300Q96RE9 604 aaPredicted RBP15.72■□□□□ 0.11
NME3-205ENST00000563854 PSD2Q9BQI7 771 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 DLL4Q9NR61 685 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 CTPS2Q9NRF8 586 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.72■□□□□ 0.11
NME3-205ENST00000563854 ACER3Q9NUN7 267 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 GPR45Q9Y5Y3 372 aa15.72■□□□□ 0.11
NME3-205ENST00000563854 NF1P21359 2839 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 PRAMEF27A3QJZ7 478 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 SULT2B1O00204 365 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 ETV2O00321 342 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 SNNO75324 88 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 GCM2O75603 506 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 PLAUP00749 431 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms