RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CDKL1Q00532 357 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CHIT1Q13231 466 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 SNX1Q13596 522 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 HLXQ14774 488 aaPredicted RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 SLC9A3R2Q15599 337 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 OASLQ15646 514 aaKnown RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 ADIPOQQ15848 244 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 ADRM1Q16186 407 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 PDK4Q16654 411 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 PRICKLE4Q2TBC4 344 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 TRMT12Q53H54 448 aaKnown RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 HSP90AA5PQ58FG0 334 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CT45A2Q5DJT8 189 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 FBXO48Q5FWF7 155 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 ZNF362Q5T0B9 420 aaPredicted RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 CPTPQ5TA50 214 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 OR7E24Q6IFN5 339 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 MED27Q6P2C8 311 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 C16orf87Q6PH81 154 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 MARCH3Q86UD3 253 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 SLC44A2Q8IWA5 706 aaPredicted RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 LMNTD2Q8IXW0 634 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 SLC43A2Q8N370 569 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 GTPBP8Q8N3Z3 284 aaPredicted RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 RNF175Q8N4F7 328 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 RNF10Q8N5U6 811 aaKnown RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 SLC9A6Q92581 669 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 SGCDQ92629 289 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 UBE2E3Q969T4 207 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 KLHL15Q96M94 604 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 RNF145Q96MT1 663 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CHP1Q99653 195 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 FAM167BQ9BTA0 163 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 SRXN1Q9BYN0 137 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 RTN4RQ9BZR6 473 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CXorf36Q9H7Y0 433 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CNOT10Q9H9A5 744 aaKnown RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 MAT2BQ9NZL9 334 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 ZNF69Q9UC07 566 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 ABCG2Q9UNQ0 655 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 RYR2Q92736 4967 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 A0A087WZY1 265 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 A0A0A6YYD5 115 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ZCWPW2A0A1B0GU75 182 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 SDR42E2A6NKP2 422 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 VSTM5A8MXK1 200 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 AKR1B15C9JRZ8 316 aaPredicted RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 CLDN34H7C241 214 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 PPIHO43447 177 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 FRS3O43559 492 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 PLPP2O43688 288 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 LIASO43766 372 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 FADS1O60427 444 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ERAL1O75616 437 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 CYP7B1O75881 506 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 SEC14L2O76054 403 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ADRA2AP08913 450 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 SELEP16581 610 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ENPP1P22413 925 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 SHC1P29353 583 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 SERPINB1P30740 379 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 MAGEA1P43355 309 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 HSPA7P48741 367 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 VPS41P49754 854 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ZNF41P51814 821 aaPredicted RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 NAP1L1P55209 391 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 UBASH3AP57075 661 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 PSPHP78330 225 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 MRPS35P82673 323 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 SARNPP82979 210 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 CDK16Q00536 496 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 COL10A1Q03692 680 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 C17orf67Q0P5P2 114 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 MGAT2Q10469 447 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 CSTF3Q12996 717 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 EFNB3Q15768 340 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ERCC6LQ2NKX8 1250 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 C2orf68Q2NKX9 166 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 SPATS1Q496A3 300 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ARMCX4Q5H9R4 360 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 FBXW9Q5XUX1 488 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 KLHL24Q6TFL4 600 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 TEPPQ6URK8 271 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 NPSR1Q6W5P4 371 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 RAD9BQ6WBX8 426 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 RBM43Q6ZSC3 357 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 GALNT5Q7Z7M9 940 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 BCL6BQ8N143 479 aaPredicted RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 WDR31Q8NA23 367 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 OR7G3Q8NG95 312 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 OR4N2Q8NGD1 307 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 PHOSPHO1Q8TCT1 267 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 ESAMQ96AP7 390 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 WDR34Q96EX3 536 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 GBP4Q96PP9 640 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 MTERF1Q99551 399 aaKnown RBP4.56□□□□□ -1.68
HERC1-213ENST00000561359 DNAJC7Q99615 494 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 KCNJ15Q99712 375 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 NPAS1Q99742 590 aa4.56□□□□□ -1.68
HERC1-213ENST00000561359 GATA5Q9BWX5 397 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms