RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 FXYD1O00168 92 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 AP3D1O14617 1153 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 DVL2O14641 736 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 TNFSF11O14788 317 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 CXCL13O43927 109 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 TNFSF13O75888 250 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 AQP8O94778 261 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 THBS1P07996 1170 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 IL7RP16871 459 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 BMP5P22003 454 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 RYKP34925 604 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 EIF1AXP47813 144 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC6A8P48029 635 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 AGFG1P52594 562 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 GYS2P54840 703 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 RPS3AP61247 264 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 PON3Q15166 354 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 GUSBP1Q15486 140 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 FBXL19-AS1Q494R0 122 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 PLEKHM3Q6ZWE6 761 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 CHMP1BQ7LBR1 199 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 GCNT2Q8N0V5 402 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 KLHL15Q96M94 604 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 SPOCK3Q9BQ16 436 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 CCDC106Q9BWC9 280 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 COQ10BQ9H8M1 238 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 RNF122Q9H9V4 155 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 MRGBPQ9NV56 204 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF443Q9Y2A4 671 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 MAST4O15021 2626 aa13.7□□□□□ -0.22
SNRPA1-213ENST00000560856 DCHS2Q6V1P9 2916 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 ABCA12Q86UK0 2595 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 A0A1W2PNV4 684 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 EVPLLA8MZ36 301 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 SYT5O00445 386 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 FAAHO00519 579 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 HNRNPRO43390 633 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 ETS2P15036 469 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 DRD4P21917 467 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 LSP1P33241 339 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 SFTPDP35247 375 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 OPRM1P35372 400 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 ACAA2P42765 397 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 GZMMP51124 257 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 CDK6Q00534 326 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 EPS8Q12929 822 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 SELENBP1Q13228 472 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 NFYCQ13952 458 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 GNA13Q14344 377 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 TMEM176BQ3YBM2 270 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 LIN52Q52LA3 116 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 COQ5Q5HYK3 327 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 RNF220Q5VTB9 566 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 LSRQ86X29 649 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF295-AS1Q8N0V1 137 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 NFKBIDQ8NI38 313 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 BBS10Q8TAM1 723 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 OSTF1Q92882 214 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 SFXN3Q9BWM7 321 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 SPATA9Q9BWV2 254 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 KAT8Q9H7Z6 458 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 CORO2BQ9UQ03 480 aa13.69□□□□□ -0.22
SNRPA1-213ENST00000560856 ANKHD1Q8IWZ3 2542 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 FBN2P35556 2912 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC22A2O15244 555 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 GCM2O75603 506 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 CRHP06850 196 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 GKN3PP0CG01 181 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 PRG2P13727 222 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 PRF1P14222 555 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 ME2P23368 584 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 IDH2P48735 452 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 ASCL1P50553 236 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 MTPNP58546 118 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 MERTKQ12866 999 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 CAPRIN1Q14444 709 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 SGCBQ16585 318 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 TRMT5Q32P41 509 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 HBMQ6B0K9 141 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 REP15Q6BDI9 236 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 REEP3Q6NUK4 255 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 P4HA3Q7Z4N8 544 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 COMTD1Q86VU5 262 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 SNX32Q86XE0 403 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 ADGRG3Q86Y34 549 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 DMRTC2Q8IXT2 367 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 STARD4Q96DR4 205 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 ELAC2Q9BQ52 826 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC39A3Q9BRY0 314 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 SRXN1Q9BYN0 137 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 ADAM19Q9H013 955 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 CTPS2Q9NRF8 586 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms