RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MUS81Q96NY9 551 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 MRPL57Q9BQC6 102 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 MRPL46Q9H2W6 279 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 FKRPQ9H9S5 495 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 UBQLN4Q9NRR5 601 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
RABGGTA-213ENST00000560127 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 SERINC4A6NH21 518 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 CCT8L1PA6NM43 557 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 SMIM24O75264 130 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 STAMBPO95630 424 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 KRT6AP02538 564 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 KRT6BP04259 564 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 RBP1P09455 135 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 TACSTD2P09758 323 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 IFI6P09912 130 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 ACP2P11117 423 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 PRPS2P11908 318 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 HPGDP15428 266 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 PRKCAP17252 672 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 APEX1P27695 318 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 NTSP30990 170 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 GSTM5P46439 218 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 KRT6CP48668 564 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 HTR6P50406 440 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 CDH15P55291 814 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 BTKQ06187 659 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 LGALS3BPQ08380 585 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 GABRA6Q16445 453 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 FAM71E1Q6IPT2 247 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF551Q7Z340 670 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 UBE2J2Q8N2K1 259 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 CDC26Q8NHZ8 85 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 FBXO30Q8TB52 745 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 ACMSDQ8TDX5 336 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 C1QTNF3Q9BXJ4 246 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 LGALS13Q9UHV8 139 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 ICAM5Q9UMF0 924 aa11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 GPC6Q9Y625 555 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-213ENST00000560127 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 A0A0G2JK05 382 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 G3V2L1 256 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SCDO00767 359 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 ULK1O75385 1050 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 RGS9O75916 674 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 PROCP04070 461 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 ITGA5P08648 1049 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 GIFP27352 417 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SLC7A1P30825 629 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 LCN1P31025 176 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 NTF4P34130 210 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 RNF144AP50876 292 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 CHN2P52757 468 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 DVL1P1P54792 670 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SNRPD2P62316 118 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SLC25A3Q00325 362 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF763Q0D2J5 394 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SELENBP1Q13228 472 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 MLC1Q15049 377 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 VPS26BQ4G0F5 336 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 UNC50Q53HI1 259 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 CCNJQ5T5M9 372 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 CDRT4Q8N9R6 151 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SLC16A11Q8NCK7 471 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 OR6Y1Q8NGX8 325 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 GPR119Q8TDV5 335 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 GIMAP5Q96F15 307 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 TMEM237Q96Q45 408 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SNX18Q96RF0 628 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 MIEF1Q9NQG6 463 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 RRAGDQ9NQL2 400 aaPredicted RBP11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 SIRT5Q9NXA8 310 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 TAS2R16Q9NYV7 291 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 ACTL7BQ9Y614 415 aa11.18□□□□□ -0.62
RABGGTA-213ENST00000560127 IGKV3D-15A0A087WSY6 115 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 H6PDO95479 791 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 NUDT14O95848 222 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 CREB1P16220 341 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 P2RX1P51575 399 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 PRKAG1P54619 331 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 CLCQ05315 142 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 HSPB3Q12988 150 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 DUSP5Q16690 384 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 ABLIM2Q6H8Q1 611 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 OR7E24Q6IFN5 339 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 PEG10Q86TG7 708 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 C4orf33Q8N1A6 199 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 PHOSPHO1Q8TCT1 267 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 APH1AQ96BI3 265 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 OTUB1Q96FW1 271 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF696Q9H7X3 374 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 ASB6Q9NWX5 421 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 MALT1Q9UDY8 824 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 MOKQ9UQ07 419 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 CARD8Q9Y2G2 431 aa11.17□□□□□ -0.62
RABGGTA-213ENST00000560127 ARHGAP32A7KAX9 2087 aa11.16□□□□□ -0.62
RABGGTA-213ENST00000560127 ZNF716A6NP11 495 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms