RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 EIF3MQ7L2H7 374 aaKnown RBP10.77□□□□□ -0.69
TPM1-216ENST00000558910 MTERF4Q7Z6M4 381 aaKnown RBP10.77□□□□□ -0.69
TPM1-216ENST00000558910 ADGRE4PQ86SQ3 457 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 LRRC34Q8IZ02 419 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 ZNF619Q8N2I2 560 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 GLB1L3Q8NCI6 653 aaPredicted RBP10.77□□□□□ -0.69
TPM1-216ENST00000558910 OR5W2Q8NH69 310 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 STARD4Q96DR4 205 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 ZC3HAV1LQ96H79 300 aaKnown RBP10.77□□□□□ -0.69
TPM1-216ENST00000558910 ITCHQ96J02 903 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 KLHL15Q96M94 604 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 SRXN1Q9BYN0 137 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 KLHL4Q9C0H6 718 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 ZNF350Q9GZX5 532 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 RMND5AQ9H871 391 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 MCCC2Q9HCC0 563 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 NPHS2Q9NP85 383 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 DNAJB12Q9NXW2 375 aaKnown RBP10.77□□□□□ -0.69
TPM1-216ENST00000558910 ZIM2Q9NZV7 527 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 CCDC167Q9P0B6 97 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 STOML1Q9UBI4 398 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 PACSIN3Q9UKS6 424 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 MCTS1Q9ULC4 181 aaKnown RBP10.77□□□□□ -0.69
TPM1-216ENST00000558910 ICAM5Q9UMF0 924 aa10.77□□□□□ -0.69
TPM1-216ENST00000558910 MED12LQ86YW9 2145 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 NPIPB9F8W1W9 429 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 LINC01387J3KSC0 135 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 KIAA0513O60268 411 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 TNFSF13O75888 250 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 KRT75O95678 551 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 AGR2O95994 175 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 BCHEP06276 602 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 PRKCAP17252 672 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 KLK2P20151 261 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 ADH6P28332 368 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 SLC7A1P30825 629 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 KIR2DL2P43627 348 aaPredicted RBP10.76□□□□□ -0.69
TPM1-216ENST00000558910 RAC1P63000 192 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 TMEM44Q2T9K0 475 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 PDSS1Q5T2R2 415 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 OR2A2Q6IF42 318 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 HEPHL1Q6MZM0 1159 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.76□□□□□ -0.69
TPM1-216ENST00000558910 ZNF550Q7Z398 422 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 ALDH16A1Q8IZ83 802 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 METTL25Q8N6Q8 603 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 ZNF610Q8N9Z0 462 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 ZFP90Q8TF47 636 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 CKAP2Q8WWK9 683 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 CNOT9Q92600 299 aaKnown RBP10.76□□□□□ -0.69
TPM1-216ENST00000558910 C14orf79Q96F83 325 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
TPM1-216ENST00000558910 OR5B2Q96R09 309 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 POLDIP3Q9BY77 421 aaKnown RBP10.76□□□□□ -0.69
TPM1-216ENST00000558910 NMUR2Q9GZQ4 415 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 LAT2Q9GZY6 243 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 ACBD3Q9H3P7 528 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 TPT1P8Q9HAU6 139 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 KCNN3Q9UGI6 736 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 PROCRQ9UNN8 238 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 CCDC168Q8NDH2 2452 aa10.76□□□□□ -0.69
TPM1-216ENST00000558910 PDZD2O15018 2839 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 A0A0G2JND7 137 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 FAM234BA2RU67 622 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 AP3D1O14617 1153 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 EIF4E2O60573 245 aaKnown RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 IL18BPO95998 194 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 POU2F1P14859 743 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 IL7RP16871 459 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 PSMA4P25789 261 aaKnown RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 ANXA11P50995 505 aaKnown RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 SESN3P58005 492 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 SKP2Q13309 424 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 ZNF141Q15928 474 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 CTU2Q2VPK5 515 aaKnown RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 ZNF474Q6S9Z5 364 aaPredicted RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 ESPNLQ6ZVH7 1005 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 CDH24Q86UP0 819 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 VRK2Q86Y07 508 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 KIF18BQ86Y91 864 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 MIPOL1Q8TD10 442 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 WDR60Q8WVS4 1066 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 ADGRG7Q96K78 797 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 MAGEB18Q96M61 343 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 ZFP3Q96NJ6 502 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 LIME1Q9H400 295 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 VIPAS39Q9H9C1 493 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 SDR39U1Q9NRG7 319 aaPredicted RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.75□□□□□ -0.69
TPM1-216ENST00000558910 KLHL28Q9NXS3 571 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 SLAMF8Q9P0V8 285 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 AKAP6Q13023 2319 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 MPDZO75970 2070 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 SPG11Q96JI7 2443 aa10.75□□□□□ -0.69
TPM1-216ENST00000558910 SOX30O94993 753 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 GKN3PP0CG01 181 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 PGCP20142 388 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 PGM1P36871 562 aa10.74□□□□□ -0.69
TPM1-216ENST00000558910 EIF1P41567 113 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms