RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 IL4I1Q96RQ9 567 aa18.64■□□□□ 0.57
SNRPA1-205ENST00000558036 MRPS26Q9BYN8 205 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-205ENST00000558036 BATF3Q9NR55 127 aa18.64■□□□□ 0.57
SNRPA1-205ENST00000558036 PAK1IP1Q9NWT1 392 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-205ENST00000558036 B4DXG7 233 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 TERTO14746 1132 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 TM4SF5O14894 197 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 TFAP2AP05549 437 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 CDC42P60953 191 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 GINS1Q14691 196 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 WBP2NLQ6ICG8 309 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 RASSF6Q6ZTQ3 369 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 TMPRSS12Q86WS5 348 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 RNF113BQ8IZP6 322 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 RHOXF1Q8NHV9 184 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 TMCO6Q96DC7 493 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 MPP4Q96JB8 637 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 P4HTMQ9NXG6 502 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 IL17BQ9UHF5 180 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 CFAP47Q6ZTR5 3102 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 PCSK5Q92824 1860 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 ZFHX4Q86UP3 3567 aa18.63■□□□□ 0.57
SNRPA1-205ENST00000558036 A0A1W2PQ72 361 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 TRIM64A6NGJ6 449 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 CSRP1P21291 193 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 PRKCDQ05655 676 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 CRYZQ08257 329 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 RBM48Q5RL73 367 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 ACSM5Q6NUN0 579 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 POMZP3Q6PJE2 187 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 DNAJA4Q8WW22 397 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 CDCP1Q9H5V8 836 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 AMBNQ9NP70 447 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 CEP250Q9BV73 2442 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 DCHS1Q96JQ0 3298 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 FBXO45P0C2W1 286 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 SAGP10523 405 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 GIPRP48546 466 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 SLX4IPQ5VYV7 408 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 OR13C2Q8NGS9 318 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 SPACA9Q96E40 222 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 GPR87Q9BY21 358 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 KRCC1Q9NPI7 259 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 KLRF1Q9NZS2 232 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 HRH3Q9Y5N1 445 aa18.62■□□□□ 0.57
SNRPA1-205ENST00000558036 A0A087WUJ7 227 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 A6NHS1 94 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 C21orf140B9A014 251 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 LRRN3E7EW58 273 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 NAGAP17050 411 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 GABRB1P18505 474 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 TMED10P49755 219 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 HLCSP50747 726 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 NUDT6P53370 316 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 TGIF1Q15583 401 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 IL20RBQ6UXL0 311 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 ZNF620Q6ZNG0 422 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 PTCHD4Q6ZW05 846 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 MRGPREQ86SM8 312 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 DEPDC4Q8N2C3 294 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 TEX47Q8TBZ9 253 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 HS6ST2Q96MM7 605 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 YTHDF1Q9BYJ9 559 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 TVP23BQ9NYZ1 205 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 UNC119BA6NIH7 251 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 ENO4A6NNW6 628 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 PROB1E7EW31 1015 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 CDC40O60508 579 aaKnown RBP eCLIP18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 EIF4E2O60573 245 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 CEACAM1P13688 526 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 CCNA2P20248 432 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 SLC1A3P43003 542 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 COL28A1Q2UY09 1125 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 C12orf73Q69YU5 71 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 SLC30A6Q6NXT4 461 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 NUP54Q7Z3B4 507 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 ATG4DQ86TL0 474 aaPredicted RBP18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 SATL1Q86VE3 508 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 IL22RA1Q8N6P7 574 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 OR5W2Q8NH69 310 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 NKD1Q969G9 470 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 ENKD1Q9H0I2 346 aa18.61■□□□□ 0.57
SNRPA1-205ENST00000558036 IGKV1D-42A0A075B6H8 117 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 TRAV27A0A087WT01 109 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 ELOA3DA6NLF2 546 aaPredicted RBP18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 HTR1AP08908 422 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 TACR3P29371 465 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 RBM34P42696 430 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 MLLT10P55197 1068 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 CTBP2P56545 445 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 FXYD6P3P58550 94 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 CDK5Q00535 292 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 ATP1A4Q13733 1029 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 NTRK2Q16620 822 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 ELOA3BQ3SY89 546 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 BROXQ5VW32 411 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 CASP12Q6UXS9 341 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 BCDIN3DQ7Z5W3 292 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 SIRT6Q8N6T7 355 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 ELOA3Q8NG57 546 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms