RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 H0Y3Z8 333 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 FAAHO00519 579 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 FRS3O43559 492 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 HOXD4P09016 255 aaPredicted RBP23.05■■□□□ 1.28
SMAD6-202ENST00000557916 T-ENOLP0DO92 83 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 PRG2P13727 222 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 ME2P23368 584 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 ACAA2P42765 397 aaKnown RBP23.05■■□□□ 1.28
SMAD6-202ENST00000557916 RAC1P63000 192 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 MEIOBQ8N635 442 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 TAMM41Q96BW9 452 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 KCTD14Q9BQ13 255 aaPredicted RBP23.05■■□□□ 1.28
SMAD6-202ENST00000557916 KLHL28Q9NXS3 571 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 SEC14L5O43304 696 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 EFNA2O43921 213 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 AGFG2O95081 481 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 EPPINO95925 133 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 IL11P20809 199 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 ELK4P28324 431 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 PTGER4P35408 488 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 SUCLG1P53597 346 aaKnown RBP23.04■■□□□ 1.28
SMAD6-202ENST00000557916 MERTKQ12866 999 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 SF3B4Q15427 424 aaKnown RBP eCLIP23.04■■□□□ 1.282e-7■■□□□ 13.4
SMAD6-202ENST00000557916 DUSP7Q16829 419 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 C1orf185Q5T7R7 199 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 RTL6Q6ICC9 239 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 COMTD1Q86VU5 262 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 DEFB107AQ8IZN7 70 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 TMEM185BQ9H7F4 350 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 FAM215AQ9Y5M1 114 aa23.04■■□□□ 1.28
SMAD6-202ENST00000557916 GSTA4O15217 222 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 KCNJ5P48544 419 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 CRYBA2P53672 197 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 DLX5P56178 289 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 CLDN20P56880 219 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 COPZ1P61923 177 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 SRSF1Q07955 248 aaKnown RBP eCLIP23.03■■□□□ 1.28
SMAD6-202ENST00000557916 PLEKHM3Q6ZWE6 761 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 LILRA2Q8N149 483 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 RPRMLQ8N4K4 120 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 FAM26EQ8N5C1 309 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 ZPLD1Q8TCW7 415 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 RASSF5Q8WWW0 418 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 DMRTA2Q96SC8 542 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 CDRT15Q96T59 188 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 PRDM4Q9UKN5 801 aa23.03■■□□□ 1.28
SMAD6-202ENST00000557916 H0YC42 278 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 IFNA14P01570 189 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 OPN1LWP04000 364 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 CD247P20963 164 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 KDELR2P33947 212 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 CPOXP36551 454 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 SLC1A3P43003 542 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 TPD52P55327 224 aaPredicted RBP23.02■■□□□ 1.28
SMAD6-202ENST00000557916 PER3P56645 1201 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 CLDN15P56746 228 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 HOXC5Q00444 222 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 ACSF3Q4G176 576 aaPredicted RBP23.02■■□□□ 1.28
SMAD6-202ENST00000557916 POMZP3Q6PJE2 187 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 B3GNT6Q6ZMB0 384 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 GRINAQ7Z429 371 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 RNF148Q8N7C7 305 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 RBM15BQ8NDT2 890 aaKnown RBP23.02■■□□□ 1.28
SMAD6-202ENST00000557916 TNIP2Q8NFZ5 429 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 FIG4Q92562 907 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 TUBA1CQ9BQE3 449 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 PACSIN3Q9UKS6 424 aa23.02■■□□□ 1.28
SMAD6-202ENST00000557916 SYT5O00445 386 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 CXCR6O00574 342 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 UBOX5O94941 541 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 LGI1O95970 557 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 C8BP07358 591 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 APOBEC1P41238 236 aaKnown RBP23.01■■□□□ 1.27
SMAD6-202ENST00000557916 HTR3AP46098 478 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 SELENBP1Q13228 472 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 LRRC23Q53EV4 343 aaPredicted RBP23.01■■□□□ 1.27
SMAD6-202ENST00000557916 WBP2NLQ6ICG8 309 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 TMEM211Q6ICI0 200 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 MTFR2Q6P444 385 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 RPTNQ6XPR3 784 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 NCCRP1Q6ZVX7 275 aaPredicted RBP23.01■■□□□ 1.27
SMAD6-202ENST00000557916 GGNQ86UU5 652 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 CADM2Q8N3J6 435 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 ATP6V1C2Q8NEY4 427 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 GPR32P1Q8NGA4 272 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 CCDC120Q96HB5 630 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 TRIB1Q96RU8 372 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 CTPS2Q9NRF8 586 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 SERINC1Q9NRX5 453 aa23.01■■□□□ 1.27
SMAD6-202ENST00000557916 CLEC18AA5D8T8 446 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 EIF1AYO14602 144 aaKnown RBP23■■□□□ 1.27
SMAD6-202ENST00000557916 SFTPDP35247 375 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 ZNF136P52737 540 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 SAMD4BQ5PRF9 694 aaKnown RBP23■■□□□ 1.27
SMAD6-202ENST00000557916 CLEC18BQ6UXF7 455 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 RINLQ6ZS11 566 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 CHMP1BQ7LBR1 199 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 MARVELD2Q8N4S9 558 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 CLEC18CQ8NCF0 446 aa23■■□□□ 1.27
SMAD6-202ENST00000557916 PHF10Q8WUB8 498 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms