RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 MICU2Q8IYU8 434 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 CLEC18CQ8NCF0 446 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 ATP6V1C2Q8NEY4 427 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 ST8SIA1Q92185 356 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 MRGPRX4Q96LA9 322 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 DMRTA2Q96SC8 542 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 VKORC1Q9BQB6 163 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 TUBA1CQ9BQE3 449 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 ARMC7Q9H6L4 198 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 SPAG4Q9NPE6 437 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 ABCD2Q9UBJ2 740 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 AP3M1Q9Y2T2 418 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 AP4B1Q9Y6B7 739 aa15.77■□□□□ 0.12
SHMT2-225ENST00000556798 LRRK2Q5S007 2527 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ELOVL7A1L3X0 281 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 PRORSD1PA6NEY8 169 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 LINC01387J3KSC0 135 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 EFNA2O43921 213 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ZG16O60844 167 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 GP1BBP13224 206 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 GABRA1P14867 456 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 SHC1P29353 583 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 SFTPDP35247 375 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ACAA2P42765 397 aaKnown RBP15.76■□□□□ 0.11
SHMT2-225ENST00000556798 CRYBA2P53672 197 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 CLDN15P56746 228 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ADORA2A-AS1P86434 159 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 MERTKQ12866 999 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 SLC25A53Q5H9E4 307 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 B3GNT6Q6ZMB0 384 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 PLEKHM3Q6ZWE6 761 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 TRPM8Q7Z2W7 1104 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 PATL1Q86TB9 770 aaKnown RBP15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ZNF440Q8IYI8 595 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 PGAM4Q8N0Y7 254 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 MEIOBQ8N635 442 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 TMEM234Q8WY98 164 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 NSL1Q96IY1 281 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 TRIB1Q96RU8 372 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 PINK1Q9BXM7 581 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ALG2Q9H553 416 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ACER3Q9NUN7 267 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 ADA2Q9NZK5 511 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 DOPEY2Q9Y3R5 2298 aa15.76■□□□□ 0.11
SHMT2-225ENST00000556798 CLCA1A8K7I4 914 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 AHRRA9YTQ3 701 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 ETV2O00321 342 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-225ENST00000556798 EIF1AYO14602 144 aaKnown RBP15.75■□□□□ 0.11
SHMT2-225ENST00000556798 LDLRP01130 860 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 UQCRBP14927 111 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 ELK4P28324 431 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 ADH6P28332 368 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 PER3P56645 1201 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 NUP107P57740 925 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 EEFSECP57772 596 aaKnown RBP15.75■□□□□ 0.11
SHMT2-225ENST00000556798 PMPCAQ10713 525 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 VEZF1Q14119 521 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 BCL2A1Q16548 175 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 ZSWIM7Q19AV6 140 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 LRRC23Q53EV4 343 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-225ENST00000556798 CCDC80Q76M96 950 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 ZNF550Q7Z398 422 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 EID3Q8N140 333 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 LILRA2Q8N149 483 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 CADM2Q8N3J6 435 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 RNF148Q8N7C7 305 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 GPR32P1Q8NGA4 272 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 SLC26A7Q8TE54 656 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 KCTD14Q9BQ13 255 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-225ENST00000556798 WFDC6Q9BQY6 131 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 TTYH2Q9BSA4 534 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 CTPS2Q9NRF8 586 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 TMEM181Q9P2C4 612 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 SLC13A4Q9UKG4 626 aa15.75■□□□□ 0.11
SHMT2-225ENST00000556798 INTS1Q8N201 2190 aaKnown RBP15.75■□□□□ 0.11
SHMT2-225ENST00000556798 CACNA1CQ13936 2221 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 B2RBV5 119 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 M0R3H8 397 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 TNFSF11O14788 317 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 T-ENOLP0DO92 83 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 GLI4P10075 376 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 CCNA2P20248 432 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 CD247P20963 164 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 ME2P23368 584 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 PTGER4P35408 488 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 RAC1P63000 192 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 SELENBP1Q13228 472 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 DUSP7Q16829 419 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 SEM1Q6ZVN7 128 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 GRINAQ7Z429 371 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 DEFB107AQ8IZN7 70 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 ZPLD1Q8TCW7 415 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 SSC4DQ8WTU2 575 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 PHF10Q8WUB8 498 aaKnown RBP15.74■□□□□ 0.11
SHMT2-225ENST00000556798 FIG4Q92562 907 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 ZNF845Q96IR2 970 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-225ENST00000556798 PRR14Q9BWN1 585 aa15.74■□□□□ 0.11
SHMT2-225ENST00000556798 SPTBN1Q01082 2364 aaKnown RBP15.73■□□□□ 0.11
SHMT2-225ENST00000556798 A0A0J9YW62 118 aa15.73■□□□□ 0.11
SHMT2-225ENST00000556798 FAAHO00519 579 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms