RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 LACC1Q8IV20 430 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF563Q8TA94 476 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 PHF10Q8WUB8 498 aaKnown RBP11.47□□□□□ -0.57
SYNE2-219ENST00000555323 MIB2Q96AX9 1013 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 TPD52L3Q96J77 140 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 NPAS1Q99742 590 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF559Q9BR84 538 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 TRIM2Q9C040 744 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 SLC6A15Q9H2J7 730 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 SPRR3Q9UBC9 169 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 RPH3AQ9Y2J0 694 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF835Q9Y2P0 537 aa11.47□□□□□ -0.57
SYNE2-219ENST00000555323 AQP12BA6NM10 295 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 M0R3H8 397 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 SEMA7AO75326 666 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 PRKD3O94806 890 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 WISP1O95388 367 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF682O95780 498 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 SEMG1P04279 462 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 GP1BBP13224 206 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 CPN1P15169 458 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 HTR2AP28223 471 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ELK4P28324 431 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 COPZ1P61923 177 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 RAC1P63000 192 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 TLE1Q04724 770 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 CRYZQ08257 329 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ZSCAN26Q16670 478 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 IFI44LQ53G44 452 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 RAET1LQ5VY80 246 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF613Q6PF04 617 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 PLEKHM3Q6ZWE6 761 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 VTCN1Q7Z7D3 282 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 RANBP3LQ86VV4 465 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 CARM1Q86X55 608 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ADGRG3Q86Y34 549 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 RBM45Q8IUH3 476 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 AQP12AQ8IXF9 295 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 OR10Q1Q8NGQ4 319 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 DNAJA4Q8WW22 397 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 GEMIN6Q8WXD5 167 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ABTB1Q969K4 478 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 UTP4Q969X6 686 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 SARAFQ96BY9 339 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 HSH2DQ96JZ2 352 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 SFXN2Q96NB2 322 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 TIMP4Q99727 224 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 UGT2B28Q9BY64 529 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 POLR2J2Q9GZM3 115 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 POLR2J3Q9H1A7 115 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 RALYQ9UKM9 306 aaKnown RBP11.46□□□□□ -0.57
SYNE2-219ENST00000555323 SLC6A5Q9Y345 797 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 ZNF337Q9Y3M9 751 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 AP4B1Q9Y6B7 739 aa11.46□□□□□ -0.57
SYNE2-219ENST00000555323 NCKAP5O14513 1909 aa11.46□□□□□ -0.58
SYNE2-219ENST00000555323 SMG1Q96Q15 3661 aaKnown RBP11.46□□□□□ -0.58
SYNE2-219ENST00000555323 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 BCKDKO14874 412 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 UMPSP11172 480 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 PEPDP12955 493 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 TNFRSF1BP20333 461 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 ATP6V1B2P21281 511 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 TACR3P29371 465 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 PTGS2P35354 604 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 GCKP35557 465 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 OR1E2P47887 323 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 LHX2P50458 406 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 HOXC5Q00444 222 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 C19orf57Q0VDD7 668 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 FOXF1Q12946 379 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 OR1Q1Q15612 314 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 IQCCQ4KMZ1 466 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 ULK3Q6PHR2 472 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 ENPP6Q6UWR7 440 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 GFRALQ6UXV0 394 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 CYP2R1Q6VVX0 501 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 Q6ZPB1 254 aaPredicted RBP11.45□□□□□ -0.58
SYNE2-219ENST00000555323 FKBP9P1Q75LS8 142 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 TSEN54Q7Z6J9 526 aaKnown RBP11.45□□□□□ -0.58
SYNE2-219ENST00000555323 FAM86B1Q8N7N1 296 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 GALNT11Q8NCW6 608 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 OR5M1Q8NGP8 315 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 CCDC124Q96CT7 223 aaKnown RBP11.45□□□□□ -0.58
SYNE2-219ENST00000555323 C7orf34Q96L11 122 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 MCHR1Q99705 422 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 PRR14Q9BWN1 585 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 AMBRA1Q9C0C7 1298 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 PRDM14Q9GZV8 571 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 TMEM27Q9HBJ8 222 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 STOML1Q9UBI4 398 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 OSGIN1Q9UJX0 560 aa11.45□□□□□ -0.58
SYNE2-219ENST00000555323 FAM208BQ5VWN6 2430 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 A0A1B0GWA3 101 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 A0A1B0GX12 115 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 SHISA8B8ZZ34 492 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ADAMDEC1O15204 470 aa11.44□□□□□ -0.58
SYNE2-219ENST00000555323 ZNF208O43345 1280 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms