RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CCDC134Q9H6E4 229 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 MTHFD2LQ9H903 347 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-209ENST00000553855 CALHM2Q9HA72 323 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 TIGARQ9NQ88 270 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SERINC1Q9NRX5 453 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 MED17Q9NVC6 651 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 KLHL14Q9P2G3 628 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 RNF6Q9Y252 685 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 CARD8Q9Y2G2 431 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SPIN1Q9Y657 262 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-209ENST00000553855 SVILO95425 2214 aa7.54□□□□□ -1.2
PSEN1-209ENST00000553855 PRRC2CQ9Y520 2896 aaKnown RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CD8B2A6NJW9 211 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 FAM90A27PA6NNH2 459 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 ADAM10O14672 748 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 ZIC3O60481 467 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 FCMRO60667 390 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CCDC22O60826 627 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SYNGR4O95473 234 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 H6PDO95479 791 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 BCHEP06276 602 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 DBIP07108 87 aaKnown RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 UBTFL6P0CB48 400 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 FCGR2AP12318 317 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 ETFAP13804 333 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 COX6B1P14854 86 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 OPRM1P35372 400 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 TIMP3P35625 211 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 STARP49675 285 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF117Q03924 483 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CHRNEQ04844 493 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SF3A3Q12874 501 aaKnown RBP eCLIP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 NFYCQ13952 458 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CD226Q15762 336 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SYPL1Q16563 259 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SLC25A35Q3KQZ1 300 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 LIN52Q52LA3 116 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SP5Q6BEB4 398 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 OR2A2Q6IF42 318 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CPLX4Q7Z7G2 160 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CDH24Q86UP0 819 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CCDC71Q8IV32 467 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 MCEMP1Q8IX19 187 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CMIPQ8IY22 773 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF440Q8IYI8 595 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 GTPBP8Q8N3Z3 284 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 METTL25Q8N6Q8 603 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 WDR60Q8WVS4 1066 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SH3GL1Q99961 368 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SPATA5L1Q9BVQ7 753 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 LAT2Q9GZY6 243 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SERHL2Q9H4I8 314 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 CGGBP1Q9UFW8 167 aaPredicted RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 SLC13A4Q9UKG4 626 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 MCTS1Q9ULC4 181 aaKnown RBP7.53□□□□□ -1.2
PSEN1-209ENST00000553855 IFT52Q9Y366 437 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF337Q9Y3M9 751 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 FAM215AQ9Y5M1 114 aa7.53□□□□□ -1.2
PSEN1-209ENST00000553855 HECTD1Q9ULT8 2610 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 A0A0G2JPF8 293 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 C7orf72A4D263 438 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 SLC22A20A6NK97 555 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 CLCA1A8K7I4 914 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 C17orf51A8MQB3 221 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 BBIP1A8MTZ0 92 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 HNRNPCL2B2RXH8 293 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 HNRNPCL3B7ZW38 293 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 HNRNPRO43390 633 aaKnown RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 HNRNPCL1O60812 293 aaKnown RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 UGT2B17O75795 530 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 CLDN1O95832 211 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PLGP00747 810 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 LINGO3P0C6S8 592 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PABPC4LP0CB38 370 aaKnown RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 RNF224P0DH78 156 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 HNRNPCL4P0DMR1 293 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 TMIGD3P0DMS9 266 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF708P17019 499 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 CTSSP25774 331 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ELK4P28324 431 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ADSLP30566 484 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 SLC7A1P30825 629 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PEX19P40855 299 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 GSK3AP49840 483 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 LHX2P50458 406 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 CLDN15P56746 228 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 COPZ1P61923 177 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 KCNJ10P78508 379 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 CYLC2Q14093 348 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 FGFBP1Q14512 234 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 RGNQ15493 299 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 LRIF1Q5T3J3 769 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 GCNT6Q5T4J0 391 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 GTF2IRD2BQ6EKJ0 949 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 TYW3Q6IPR3 259 aaKnown RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ARSKQ6UWY0 536 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 FRRS1Q6ZNA5 592 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ESPNLQ6ZVH7 1005 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 NCCRP1Q6ZVX7 275 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms