RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SVOPLQ8N434 492 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 LRRC17Q8N6Y2 441 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 L3MBTL4Q8NA19 623 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 FBXO36Q8NEA4 188 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 ATP6V1C2Q8NEY4 427 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 TRIM58Q8NG06 486 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.69□□□□□ -1.667e-7■■■■□ 20.5
HOXB3-213ENST00000552000 POC1BQ8TC44 478 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 FAM110BQ8TC76 370 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 GRK7Q8WTQ7 553 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 GATAD2BQ8WXI9 593 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 ATP6V1E2Q96A05 226 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 CPNE4Q96A23 557 aaPredicted RBP4.69□□□□□ -1.66
HOXB3-213ENST00000552000 ZBTB8AQ96BR9 441 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 GPR22Q99680 433 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 NOL11Q9H8H0 719 aaKnown RBP4.69□□□□□ -1.66
HOXB3-213ENST00000552000 COQ10BQ9H8M1 238 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 ANKZF1Q9H8Y5 726 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 FKRPQ9H9S5 495 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 NMRAL1Q9HBL8 299 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 GP6Q9HCN6 339 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 Q9N2J8 555 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 MYOZ1Q9NP98 299 aaPredicted RBP4.69□□□□□ -1.66
HOXB3-213ENST00000552000 LZTFL1Q9NQ48 299 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 NSMCE4AQ9NXX6 385 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 TAS2R9Q9NYW1 312 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 NTMQ9P121 344 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 FBXO9Q9UK97 447 aaPredicted RBP4.69□□□□□ -1.66
HOXB3-213ENST00000552000 PCDHB10Q9UN67 800 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 ACOT9Q9Y305 439 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 SLC25A15Q9Y619 301 aa4.69□□□□□ -1.66
HOXB3-213ENST00000552000 GXYLT2A0PJZ3 443 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 C7orf72A4D263 438 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 CCT8L1PA6NM43 557 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 CXorf49A8MYA2 514 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 OR7A17O14581 309 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 EFNA2O43921 213 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 COQ9O75208 318 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SNUPNO95149 360 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SLU7O95391 586 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 STAMBPO95630 424 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 IGKV1D-16P01601 117 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 IL3P08700 152 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 IMPDH2P12268 514 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 GABRA3P34903 492 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 LIMS1P48059 325 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 FNTAP49354 379 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 CCNG1P51959 295 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 DVL1P1P54792 670 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 ARL4CP56559 192 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 RAB10P61026 200 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SNRPD2P62316 118 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 CLCQ05315 142 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SLC18A2Q05940 514 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 RASGEF1BQ0VAM2 473 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 FOXF1Q12946 379 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 PDIA2Q13087 525 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SCGB2A2Q13296 93 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 MORF4L2Q15014 288 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 TRIP10Q15642 601 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 ZKSCAN8Q15776 578 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 TCHHL1Q5QJ38 904 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 RAPH1Q70E73 1250 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 GALNT5Q7Z7M9 940 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 GLCCI1Q86VQ1 547 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 UBE2J2Q8N2K1 259 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SLC43A2Q8N370 569 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 C1orf52Q8N6N3 182 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 TOR1AIP2Q8NFQ8 470 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 TRPC4APQ8TEL6 797 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 MRPL24Q96A35 216 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 LRRC39Q96DD0 335 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF300Q96RE9 604 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 BBS4Q96RK4 519 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 RBBP8Q99708 897 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 PSD2Q9BQI7 771 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 SPATA9Q9BWV2 254 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 BCO1Q9HAY6 547 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 LPAR2Q9HBW0 351 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 FARSBQ9NSD9 589 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 GIMAP4Q9NUV9 329 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 ARMCX1Q9P291 453 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 CPSF2Q9P2I0 782 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 KLHL9Q9P2J3 617 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 TXNDC16Q9P2K2 825 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 RNF14Q9UBS8 474 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 ING1Q9UK53 422 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 MRTO4Q9UKD2 239 aaKnown RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 C19orf53Q9UNZ5 99 aaPredicted RBP4.68□□□□□ -1.66
HOXB3-213ENST00000552000 DNAH3Q8TD57 4116 aa4.68□□□□□ -1.66
HOXB3-213ENST00000552000 GOLGA6L10A0A0M3HER8 536 aa4.67□□□□□ -1.66
HOXB3-213ENST00000552000 SYCE1LA8MT33 242 aa4.67□□□□□ -1.66
HOXB3-213ENST00000552000 B4DSR2 109 aa4.67□□□□□ -1.66
HOXB3-213ENST00000552000 PGRMC1O00264 195 aaKnown RBP4.67□□□□□ -1.66
HOXB3-213ENST00000552000 ZNF195O14628 629 aa4.67□□□□□ -1.66
HOXB3-213ENST00000552000 RGS14O43566 566 aa4.67□□□□□ -1.66
HOXB3-213ENST00000552000 OXSR1O95747 527 aaPredicted RBP4.67□□□□□ -1.66
HOXB3-213ENST00000552000 PDYNP01213 254 aa4.67□□□□□ -1.66
HOXB3-213ENST00000552000 JUNP05412 331 aaKnown RBP4.67□□□□□ -1.66
HOXB3-213ENST00000552000 TACSTD2P09758 323 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms