RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KLHL15Q96M94 604 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 RHOXF2Q9BQY4 288 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 TACO1Q9BSH4 297 aaKnown RBP6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 MECRQ9BV79 373 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 FUT8Q9BYC5 575 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 CXorf56Q9H5V9 222 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 LRTM1Q9HBL6 345 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 SIRT3Q9NTG7 399 aaPredicted RBP6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 KLHL13Q9P2N7 655 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 MCTS1Q9ULC4 181 aaKnown RBP6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 TMCO1Q9UM00 188 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 ABCG2Q9UNQ0 655 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 B3GALT5Q9Y2C3 310 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 RNF115Q9Y4L5 304 aa6.05□□□□□ -1.44
PRPF40B-214ENST00000551320 IGLV3-32A0A0A0MS00 114 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 E7EQL1 145 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 NPIPB8E9PQR5 432 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ABCD4O14678 606 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 RGS13O14921 159 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 PHF1O43189 567 aaPredicted RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 RIPK2O43353 540 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 RAD51DO75771 328 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 UBOX5O94941 541 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 GOSR1O95249 250 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 C6orf47O95873 294 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 IGLV1-40P01703 118 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 F13BP05160 661 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 HMGN2P05204 90 aaKnown RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ENO1P06733 434 aaKnown RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 TUBBP07437 444 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 MYL2P10916 166 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 IGHV1-2P23083 117 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ARRB2P32121 409 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 CLK3P49761 638 aaKnown RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 CDH11P55287 796 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 PKNOX1P55347 436 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 TP53BP2Q13625 1128 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 KRTAP24-1Q3LI83 254 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ZYG11AQ6WRX3 759 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 FRMD7Q6ZUT3 714 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 FCRLAQ7L513 359 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 BHLHA15Q7RTS1 189 aaPredicted RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 CCDC103Q8IW40 242 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 MMGT1Q8N4V1 131 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 CCDC63Q8NA47 563 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 SPATA3Q8NHX4 192 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 FAM110BQ8TC76 370 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 RNF128Q8TEB7 428 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF75CPQ92670 426 aaPredicted RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 FBXW5Q969U6 566 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 C3orf49Q96BT1 292 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 PPCDCQ96CD2 204 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 FAM120BQ96EK7 910 aaKnown RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 PPP1R36Q96LQ0 422 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 C3orf30Q96M34 536 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 OR5B2Q96R09 309 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 TRIM2Q9C040 744 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 SERHL2Q9H4I8 314 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 CISD1Q9NZ45 108 aaKnown RBP6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 KCNE5Q9UJ90 142 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ZNF180Q9UJW8 692 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 ICAM5Q9UMF0 924 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 GPR52Q9Y2T5 361 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
PRPF40B-214ENST00000551320 A0A096LNT2 108 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 CLDN24A6NM45 220 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 M0R1B8 84 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 GTPBP1O00178 669 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 SCDO00767 359 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PIP5K1BO14986 540 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 SMAD9O15198 467 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 GSC2O15499 205 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PLIN3O60664 434 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 FCMRO60667 390 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PEX11AO75192 247 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 RSL1D1O76021 490 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 TP53P04637 393 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ALOX5P09917 674 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 FCGR2AP12318 317 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 BCKDHAP12694 445 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 HPGDP15428 266 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PRKCAP17252 672 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PSMB1P20618 241 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 ME2P23368 584 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 RYKP34925 604 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 EEF1A1P68104 462 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 POU6F2P78424 691 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 SLC25A3Q00325 362 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 LGALS3BPQ08380 585 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PTGR1Q14914 329 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 QPRTQ15274 297 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 GPR68Q15743 365 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 MAPK14Q16539 360 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 GLYR1Q49A26 553 aaPredicted RBP6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 CFAP157Q5JU67 520 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 PDZK1Q5T2W1 519 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 EEF1A1P5Q5VTE0 462 aa6.03□□□□□ -1.44
PRPF40B-214ENST00000551320 HEPHL1Q6MZM0 1159 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms