RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 OR10D3Q8NH80 312 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 LINC01560Q8TB33 94 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PMM1Q92871 262 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ZG16BQ96DA0 208 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ITCHQ96J02 903 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 MRGPRX4Q96LA9 322 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TRNT1Q96Q11 434 aaKnown RBP8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CCDC28BQ9BUN5 200 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 RMND5AQ9H871 391 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 MTHFD2LQ9H903 347 aaPredicted RBP8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TIGARQ9NQ88 270 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 GLRX2Q9NS18 164 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 DNAJB12Q9NXW2 375 aaKnown RBP8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 MCTS1Q9ULC4 181 aaKnown RBP8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SLC35A3Q9Y2D2 325 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PRR14LQ5THK1 2151 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 MED13LQ71F56 2210 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CSMD2Q7Z408 3487 aa8.73□□□□□ -1.01
TNFRSF1A-214ENST00000543048 OTOGQ6ZRI0 2925 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 FAM221AA4D161 298 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 A6NNC1 897 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 NDUFAB1O14561 156 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TNFSF11O14788 317 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 KIAA0513O60268 411 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 AQP8O94778 261 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 H6PDO95479 791 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ANP32DO95626 131 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 NTN1O95631 604 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 C1QCP02747 245 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PABPC4LP0CB38 370 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ZCCHC18P0CG32 403 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TROVE2P10155 538 aaKnown RBP eCLIP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PGCP20142 388 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ELK4P28324 431 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SFTPDP35247 375 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PGM1P36871 562 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SLC6A8P48029 635 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 MRPL19P49406 292 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PCYT1AP49585 367 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CCR4P51679 360 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CTBP2P56545 445 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SIRPAP78324 504 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 KCNJ10P78508 379 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 HPCAP84074 193 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 FOXF1Q12946 379 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 QPRTQ15274 297 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SYPL1Q16563 259 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CTU2Q2VPK5 515 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 COX20Q5RI15 118 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PPP4R4Q6NUP7 873 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 FRRS1Q6ZNA5 592 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 LRRC74BQ6ZQY2 392 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 FAM214BQ7L5A3 538 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TMEM200AQ86VY9 491 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ZNF619Q8N2I2 560 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TMCO5AQ8N6Q1 288 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ANKFN1Q8N957 763 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 BCAS4Q8TDM0 211 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ZFP90Q8TF47 636 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TMEM234Q8WY98 164 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ST8SIA1Q92185 356 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 KLHL15Q96M94 604 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 DACH2Q96NX9 599 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CCT8L2Q96SF2 557 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 SLC39A3Q9BRY0 314 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 POLDIP3Q9BY77 421 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 RABEP2Q9H5N1 569 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TMEM185BQ9H7F4 350 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 TCF7L2Q9NQB0 619 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 PLSCR4Q9NRQ2 329 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ACER3Q9NUN7 267 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 GALNT8Q9NY28 637 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 ELOVL5Q9NYP7 299 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-214ENST00000543048 CENPVL1A0A0U1RR11 272 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ETV2O00321 342 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PLGP00747 810 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CGAP01215 116 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 UBTFL6P0CB48 400 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NR2F1P10589 423 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CD8BP10966 210 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BMP2P12643 396 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CD79BP40259 229 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 AQP5P55064 265 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SESN3P58005 492 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 STX1BP61266 288 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 IRX1P78414 480 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FAM27E3Q08E93 113 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FUT5Q11128 374 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SKP2Q13309 424 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GUSBP1Q15486 140 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TIGD2Q4W5G0 525 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GKAP1Q5VSY0 366 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF474Q6S9Z5 364 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SPATA21Q7Z572 469 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CDH24Q86UP0 819 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms