RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-206	ENST00000541836	DMKN	Q6E0U4	476 aa	Predicted RBP	12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GSG1L	Q6UXU4	331 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	UBE3D	Q7Z6J8	389 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	PCSK9	Q8NBP7	692 aa	Known RBP	12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR52B4	Q8NGK2	314 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ATOH1	Q92858	354 aa	Predicted RBP	12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR1F2P	Q96R84	312 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SLC38A3	Q99624	504 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GINS4	Q9BRT9	223 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	VN1R3	Q9BXE9	311 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	C1QTNF2	Q9BXJ5	285 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TMPRSS13	Q9BYE2	586 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	EVA1A	Q9H8M9	152 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	AKAP7	Q9P0M2	348 aa	Predicted RBP	12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GMEB2	Q9UKD1	530 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	PCDHGA5	Q9Y5G8	931 aa		12.69	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TRAV1-2	A0A0B4J238	106 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836		A0A1W2PS29	197 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR1F1	O43749	312 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	FCMR	O60667	390 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ABLIM3	O94929	683 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR2A4	O95047	310 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ASGR2	P07307	311 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	PTHLH	P12272	177 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	PPP3CB	P16298	524 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	BMP7	P18075	431 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TEAD1	P28347	426 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	NOS3	P29474	1203 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	MAT2A	P31153	395 aa	Known RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ZNF85	Q03923	595 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	CAMK1	Q14012	370 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	C9orf64	Q5T6V5	341 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	RNF180	Q86T96	592 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	THEM6	Q8WUY1	208 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	MRPS24	Q96EL2	167 aa	Known RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	LMLN	Q96KR4	655 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR2A7	Q96R45	310 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR7D2	Q96RA2	312 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ELAC1	Q9H777	363 aa	Known RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GPN1	Q9HCN4	374 aa	Predicted RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	MED11	Q9P086	117 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ZNF98	A6NK75	572 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SLC22A31	A6NKX4	558 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836		K7ESM1	405 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR5F1	O95221	314 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SPDEF	O95238	335 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OLFM2	O95897	454 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ECD	O95905	644 aa	Predicted RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	HIST1H2AB	P04908	130 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GYPB	P06028	91 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	CLTB	P09497	229 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SBK2	P0C263	348 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	HOXB3	P14651	431 aa	Predicted RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	CBX5	P45973	191 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	FXYD6P3	P58550	94 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	AP3S2	P59780	193 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	DUSP2	Q05923	314 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	AGER	Q15109	404 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TP53I3	Q53FA7	332 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ELFN2	Q5R3F8	820 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	HES5	Q5TA89	166 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TPGS2	Q68CL5	300 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	HTR3D	Q70Z44	454 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	HIST3H2A	Q7L7L0	130 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SSX6	Q7RTT6	188 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TEX19	Q8NA77	164 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	CYB561A3	Q8NBI2	242 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	HIST1H2AC	Q93077	130 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	RAD51AP1	Q96B01	352 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ORAI1	Q96D31	301 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR14A2	Q96R54	314 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ZDHHC5	Q9C0B5	715 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SLC6A17	Q9H1V8	727 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	INPP5E	Q9NRR6	644 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	TAS2R5	Q9NYW4	299 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SPG21	Q9NZD8	308 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	KLHL9	Q9P2J3	617 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	FBXL4	Q9UKA2	621 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	NAP1L6	A6NFF2	107 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	UNC119B	A6NIH7	251 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ITGA10	O75578	1167 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ARL6IP5	O75915	188 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	KRT33A	O76009	404 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GABRR2	P28476	465 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	RPL35	P42766	123 aa	Known RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	FLI1	Q01543	452 aa	Predicted RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ZNF626	Q68DY1	528 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	RFLNB	Q8N5W9	214 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	OR5M1	Q8NGP8	315 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ZDHHC1	Q8WTX9	485 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SMPDL3B	Q92485	455 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	LRRC46	Q96FV0	321 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	FN3K	Q9H479	309 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	ZCCHC4	Q9H5U6	513 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	IL21	Q9HBE4	155 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	SLC6A20	Q9NP91	592 aa		12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.68	□□□□□ -0.38
NPIPA1-206	ENST00000541836	GABARAP	H6UMI1	98 aa		12.67	□□□□□ -0.38
NPIPA1-206	ENST00000541836	BHLHE40	O14503	412 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms