RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 VPS35Q96QK1 796 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 MCHR1Q99705 422 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 CITED1Q99966 193 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 FICDQ9BVA6 458 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 MAGT1Q9H0U3 335 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 PLGRKTQ9HBL7 147 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 AIPL1Q9NZN9 384 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 XPO7Q9UIA9 1087 aaKnown RBP2.04□□□□□ -2.08
MDM2-227ENST00000540709 PHF11Q9UIL8 331 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 MGAT4BQ9UQ53 548 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 OARD1Q9Y530 152 aa2.04□□□□□ -2.08
MDM2-227ENST00000540709 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 IGKV1D-17A0A075B6S4 117 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 E7ESA3 106 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 CCER2I3L3R5 266 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 SULT2B1O00204 365 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 HCN1O60741 890 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 MT-ND3P03897 115 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 TNNI3P19429 210 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 IL10P22301 178 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 COX7A1P24310 79 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 RPS9P46781 194 aaKnown RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 ACTA1P68133 377 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 HSF2Q03933 536 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 CCDC173Q0VFZ6 552 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 SLAQ13239 276 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 MADCAM1Q13477 382 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 UNQ9370/PRO34162Q6UXP9 181 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 ABHD12BQ7Z5M8 362 aaPredicted RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 TMEM17Q86X19 198 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 HDDC3Q8N4P3 179 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 MRPL43Q8N983 215 aaKnown RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 TCTEX1D2Q8WW35 142 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 SAMD8Q96LT4 415 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 RNF126Q9BV68 326 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 GSDMCQ9BYG8 508 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 ACTR8Q9H981 624 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 WRAP73Q9P2S5 460 aaPredicted RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 ATXN10Q9UBB4 475 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 NUFIP1Q9UHK0 495 aaKnown RBP2.03□□□□□ -2.08
MDM2-227ENST00000540709 CHMP2BQ9UQN3 213 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 USP16Q9Y5T5 823 aa2.03□□□□□ -2.08
MDM2-227ENST00000540709 A0A1B0GWB2 263 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 NKX2-6A6NCS4 301 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 ZNF705EA8MWA4 302 aaPredicted RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 NBR2O15453 112 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 RIPK2O43353 540 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 JAK2O60674 1132 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 SEC22BO75396 215 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 VPS26AO75436 327 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 TGFAP01135 160 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 GIPP09681 153 aaPredicted RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 YBEYP58557 167 aaPredicted RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 STARD6P59095 220 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 SPP2Q13103 211 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 LAGE3Q14657 143 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 ARL6IP1Q15041 203 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 TMEM52BQ4KMG9 183 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 C16orf62Q7Z3J2 963 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 TMEM61Q8N0U2 210 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 OR51G1Q8NGK1 321 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 TMEM158Q8WZ71 300 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 MYLPFQ96A32 169 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 RNF185Q96GF1 192 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 FAM210BQ96KR6 192 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 FOPNLQ96NB1 174 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 FAM111AQ96PZ2 611 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 CYP2S1Q96SQ9 504 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 KCNK16Q96T55 309 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 PELOQ9BRX2 385 aaKnown RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 RSPH9Q9H1X1 276 aaPredicted RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 SLC25A22Q9H936 323 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 DBNDD1Q9H9R9 158 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 SOHLH2Q9NX45 425 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 MTRF1LQ9UGC7 380 aaKnown RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 HOOK1Q9UJC3 728 aaKnown RBP2.02□□□□□ -2.09
MDM2-227ENST00000540709 ANAPC7Q9UJX3 599 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 ERVW-1Q9UQF0 538 aa2.02□□□□□ -2.09
MDM2-227ENST00000540709 ABCC9O60706 1549 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 SLIT3O75094 1523 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 NCAPD2Q15021 1401 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 PP2D1A8MPX8 630 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 H3BMQ9 156 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 PES1O00541 588 aaKnown RBP2.01□□□□□ -2.09
MDM2-227ENST00000540709 KIAA0754O94854 1291 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 SLITRK3O94933 977 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 PCCBP05166 539 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 PAICSP22234 425 aaKnown RBP2.01□□□□□ -2.09
MDM2-227ENST00000540709 DNAJB1P25685 340 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 ANXA13P27216 316 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 CCND2P30279 289 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 PTGFRP43088 359 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 MAGEA5P43359 124 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 RAB40BQ12829 278 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 TRIP10Q15642 601 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 CHI3L2Q15782 390 aa2.01□□□□□ -2.09
MDM2-227ENST00000540709 C1orf146Q5VVC0 180 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms