RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NTNG1Q9Y2I2 539 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TIMM22Q9Y584 194 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 COLEC10Q9Y6Z7 277 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LRP6O75581 1613 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LRPPRCP42704 1394 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TNRQ92752 1358 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NWD1Q149M9 1564 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PHF3Q92576 2039 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CACNA1AO00555 2505 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KIR2DL5BA0A0G2JN68 375 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KIR2DL5BA0A0G2JPC4 375 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 A0A1W2PRD5 423 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF840PA6NDX5 716 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CCT8L1PA6NM43 557 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SOCS3O14543 225 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DYNC1I1O14576 645 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZSCAN12O43309 604 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SPOPO43791 374 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GMFGO60234 142 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OTCP00480 354 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CT45A6P0DMU7 189 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CT45A5P0DMU8 189 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CT45A7P0DMV0 189 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RPL35AP18077 110 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IMPDH1P20839 514 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TUBG1P23258 451 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NF2P35240 595 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 HMGCLP35914 325 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ETV5P41161 510 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OR3A4PP47883 348 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 VCPP55072 806 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PEX3P56589 373 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 EIF3EP60228 445 aaKnown RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LMO4P61968 165 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IRX3P78415 501 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OGDHQ02218 1023 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 BDH1Q02338 343 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CALCOCO2Q13137 446 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SLAMF1Q13291 335 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NECTIN1Q15223 517 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 P2RY14Q15391 338 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 MAPK11Q15759 364 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC14Q49A88 953 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CT45A1Q5HYN5 189 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KLF17Q5JT82 389 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CTSL3PQ5NE16 218 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LIN9Q5TKA1 542 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 BSPRYQ5W0U4 402 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DMKNQ6E0U4 476 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 STEAP1BQ6NZ63 245 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF562Q6V9R5 426 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP5-5Q701N2 237 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SLC26A9Q7LBE3 791 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KIAA1328Q86T90 577 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF573Q86YE8 665 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SKA3Q8IX90 412 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KIR2DL5AQ8N109 375 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PQLC3Q8N755 202 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF614Q8N883 585 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC197Q8NCU1 140 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LILRB4Q8NHJ6 448 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KIR2DL5BQ8NHK3 375 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CT45A3Q8NHU0 189 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GLYATL2Q8WU03 294 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 UBE2E3Q969T4 207 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 FAM104AQ969W3 186 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NABP1Q96AH0 204 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 C12orf42Q96LP6 360 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 FAM210AQ96ND0 272 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 KCNA7Q96RP8 456 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CHP1Q99653 195 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CARD6Q9BX69 1037 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 GCOM2Q9BZD3 368 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 OR52A5Q9H2C5 316 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 POMKQ9H5K3 350 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM231Q9H6L2 316 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RNF121Q9H920 327 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 FGF22Q9HCT0 170 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TUBG2Q9NRH3 451 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 RAB20Q9NX57 234 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF319Q9P2F9 582 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 POLKQ9UBT6 870 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 DBF4Q9UBU7 674 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF580Q9UK33 172 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SCML2Q9UQR0 700 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IFT52Q9Y366 437 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 AP1M2Q9Y6Q5 423 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 PRDM2Q13029 1718 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 AFF2P51816 1311 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 TTC41PQ6P2S7 1318 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 CASZ1Q86V15 1759 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 NLRC5Q86WI3 1866 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 LRRC7Q96NW7 1537 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 THSD7BQ9C0I4 1608 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 SHPRHQ149N8 1683 aa0.83□□□□□ -2.28
HIF1A-204ENST00000539097 IGHV3-16A0A0C4DH30 117 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 A0A1W2PPV9 198 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NKX2-6A6NCS4 301 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SNTNA6NMZ2 147 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms