RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MAGEA5	P43359	124 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	RAB9A	P51151	201 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	RWDD2B	P57060	319 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	C21orf59	P57076	290 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	KRTAP10-5	P60370	271 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	RPL27	P61353	136 aa	Known RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	NOP14	P78316	857 aa	Known RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	BST2	Q10589	180 aa	Known RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	GPR17	Q13304	367 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ITPK1	Q13572	414 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	FCN2	Q15485	313 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	FAM106A	Q4KMX7	169 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ATP1A1-AS1	Q5TC04	95 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	LIN9	Q5TKA1	542 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	HHAT	Q5VTY9	493 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	CST9	Q5W186	159 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	FAM71F2	Q6NXP2	309 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TMEM220	Q6QAJ8	160 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TMEM207	Q6UWW9	146 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TMEM107	Q6UX40	140 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	VIT	Q6UXI7	678 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF730	Q6ZMV8	503 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	GCNT7	Q6ZNI0	430 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979		Q6ZVQ6	151 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	KIRREL3	Q8IZU9	778 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF843	Q8N446	348 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	OR51G2	Q8NGK0	314 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	OR1L3	Q8NH93	324 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	LRRC15	Q8TF66	581 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	GLYATL2	Q8WU03	294 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ELMO1	Q92556	727 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	C10orf35	Q96D05	121 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ELMO2	Q96JJ3	720 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	COPS8	Q99627	209 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	SLC30A2	Q9BRI3	323 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TTYH2	Q9BSA4	534 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	APOO	Q9BUR5	198 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TSSK1B	Q9BXA7	367 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	GFRA4	Q9GZZ7	299 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	FAM49A	Q9H0Q0	323 aa	Predicted RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	SLC25A51	Q9H1U9	297 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	NARFL	Q9H6Q4	476 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	C3orf14	Q9HBI5	128 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TMEM165	Q9HC07	324 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	LZTFL1	Q9NQ48	299 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	KLHL28	Q9NXS3	571 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TUBGCP4	Q9UGJ1	667 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	PURG	Q9UJV8	347 aa	Known RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	ANAPC7	Q9UJX3	599 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	TBC1D24	Q9ULP9	559 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	POLDIP2	Q9Y2S7	368 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	KIF24	Q5T7B8	1368 aa		3.96	□□□□□ -1.78
ATM-223	ENST00000533979	FAM208A	Q9UK61	1670 aa	Known RBP	3.96	□□□□□ -1.78
ATM-223	ENST00000533979	NEDD4	P46934	1319 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	LTBP1	Q14766	1721 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	COL24A1	Q17RW2	1714 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	N4BP2	Q86UW6	1770 aa	Predicted RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	RTL1	A6NKG5	1358 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979		A0A1W2PPE3	182 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	LOC390937	A0A1W2PQ73	354 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	GABRR3	A8MPY1	467 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF879	B4DU55	563 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	HHLA1	C9JL84	531 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	SIGLEC5	O15389	551 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	EFNA2	O43921	213 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	SRPX2	O60687	465 aa	Predicted RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	FTH1	P02794	183 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ADORA3	P0DMS8	318 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ETS2	P15036	469 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	GCFC2	P16383	781 aa	Known RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	PGC	P20142	388 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	AADAC	P22760	399 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	TUBG1	P23258	451 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	UGT1A5	P35504	534 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	LONP1	P36776	959 aa	Known RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	NAMPT	P43490	491 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	OR3A2	P47893	321 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ATP1B3	P54709	279 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	CDH6	P55285	790 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	RGS8	P57771	180 aa	Predicted RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	RIG	Q13278	110 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	C1orf61	Q13536	156 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ATXN7L3	Q14CW9	347 aa	Predicted RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	CHRNA6	Q15825	494 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF74	Q16587	644 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	MTHFSD	Q2M296	383 aa	Known RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF876P	Q49A33	203 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	C14orf177	Q52M58	125 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	WDR38	Q5JTN6	314 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	BEND6	Q5SZJ8	279 aa	Predicted RBP	3.95	□□□□□ -1.78
ATM-223	ENST00000533979	WLS	Q5T9L3	541 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	H2BFWT	Q7Z2G1	175 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	DHDDS	Q86SQ9	333 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	PIGZ	Q86VD9	579 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	GVQW1	Q8N7I0	195 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	STPG4	Q8N801	248 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	TRPV1	Q8NER1	839 aa		3.95	□□□□□ -1.78
ATM-223	ENST00000533979	KBTBD8	Q8NFY9	601 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms