RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PLCE1Q9P212 2302 aa7.91□□□□□ -1.14
VPS11-203ENST00000529545 HEATR1Q9H583 2144 aaKnown RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 ANK2Q01484 3957 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 A0A1W2PNR3 127 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 LOC390937A0A1W2PQ73 354 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 SERTM1A2A2V5 107 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 VWC2LB2RUY7 222 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 CRCPO75575 148 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 LY6HO94772 140 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ACP2P11117 423 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ITGA2P17301 1181 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 IMPDH1P20839 514 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 SNRPD2P62316 118 aaKnown RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 CSNK2A1P68400 391 aaPredicted RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 MLC1Q15049 377 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 TRADDQ15628 312 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 DUSP5Q16690 384 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 NOXRED1Q6NXP6 359 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ZDHHC24Q6UX98 284 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 LRIG3Q6UXM1 1119 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 B3GLCTQ6Y288 498 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ZAR1Q86SH2 424 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 SLC22A9Q8IVM8 553 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 TMCO5AQ8N6Q1 288 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 RFWD2Q8NHY2 731 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 HOXB13Q92826 284 aaPredicted RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 APH1AQ96BI3 265 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 FBXO17Q96EF6 278 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ZHX1-C8orf76Q96EF9 292 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 FOXN4Q96NZ1 517 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 OR5B2Q96R09 309 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ZNF300Q96RE9 604 aaPredicted RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 PAFAH2Q99487 392 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 BTBD2Q9BX70 525 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 C1QTNF6Q9BXI9 259 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 RRAGDQ9NQL2 400 aaPredicted RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 SERINC1Q9NRX5 453 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 TAS2R16Q9NYV7 291 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 ING1Q9UK53 422 aaPredicted RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 CARD8Q9Y2G2 431 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 NOSIPQ9Y314 301 aaKnown RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 POLR3HQ9Y535 204 aaPredicted RBP7.9□□□□□ -1.14
VPS11-203ENST00000529545 SLC25A15Q9Y619 301 aa7.9□□□□□ -1.14
VPS11-203ENST00000529545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
VPS11-203ENST00000529545 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 IGHV4-61A0A0C4DH41 118 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 A0A1W2PR80 420 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 TRIM49D1C9J1S8 452 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 POC1B-GALNT4F8VUJ3 575 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SULT2B1O00204 365 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 GPR171O14626 319 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SMAD9O15198 467 aaKnown RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 MRPL33O75394 65 aaKnown RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 RSL1D1O76021 490 aaKnown RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 IGHV3-9P01782 118 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 GSTA1P08263 222 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SBK3P0C264 359 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 ZNF23P17027 643 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 PRKCAP17252 672 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 PCMT1P22061 227 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 ATP5F1P24539 256 aaPredicted RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 CCR4P51679 360 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 PHC1P78364 1004 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 C2orf54Q08AI8 447 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 CCNJQ5T5M9 372 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 C3orf33Q6P1S2 294 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 CBLN3Q6UW01 205 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SLC46A3Q7Z3Q1 461 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 ZNF614Q8N883 585 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 TOR1AIP2Q8NFQ8 470 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 OR5W2Q8NH69 310 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SGMS2Q8NHU3 365 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 GPR119Q8TDV5 335 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 PPCDCQ96CD2 204 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 GIMAP5Q96F15 307 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 C16orf58Q96GQ5 468 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 C1orf159Q96HA4 380 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 TMEM237Q96Q45 408 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 KCNA7Q96RP8 456 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 STACQ99469 402 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 KLHDC3Q9BQ90 382 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 MID1IP1Q9NPA3 183 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 GIN1Q9NXP7 522 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 NINJ2Q9NZG7 142 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 SH3BP4Q9P0V3 963 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 TMEFF2Q9UIK5 374 aaPredicted RBP7.89□□□□□ -1.15
VPS11-203ENST00000529545 ICAM5Q9UMF0 924 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 TRAF6Q9Y4K3 522 aa7.89□□□□□ -1.15
VPS11-203ENST00000529545 A0A0A6YYJ9 748 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SLCO1B7G3V0H7 640 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 H3BQF6 201 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SEC22BO75396 215 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SNUPNO95149 360 aaKnown RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 IGHA1P01876 353 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 KRT16P08779 473 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SNRPAP09012 282 aaKnown RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 FAM157BP0CG42 384 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms