RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RAB11FIP2Q7L804 512 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 PRSS41Q7RTY9 318 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 WDR53Q7Z5U6 358 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 ZNF761Q86XN6 746 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 GID4Q8IVV7 300 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 NRMQ8IXM6 262 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 ZNF440Q8IYI8 595 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 IQCF1Q8N6M8 205 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 ANKK1Q8NFD2 765 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 RNF217Q8TC41 542 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 HOXB13Q92826 284 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 ZG16BQ96DA0 208 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 HSPBAP1Q96EW2 488 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 RNFT2Q96EX2 444 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 AHCYL2Q96HN2 611 aaKnown RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 CHCHD6Q9BRQ6 235 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 B3GNT4Q9C0J1 378 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 FOLH1BQ9HBA9 442 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 FAM60AQ9NP50 221 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 FAIMQ9NVQ4 179 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 IL20Q9NYY1 176 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 RPS6KB2Q9UBS0 482 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 STUB1Q9UNE7 303 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 BAIAP2Q9UQB8 552 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 MED31Q9Y3C7 131 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 CCDC88CQ9P219 2028 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 COL27A1Q8IZC6 1860 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 ITPR2Q14571 2701 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 TMEM129A0AVI4 362 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 HTR3EA5X5Y0 456 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 SYNDIG1LA6NDD5 238 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 METTL15A6NJ78 407 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 NTN3O00634 580 aaPredicted RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 DNAJB6O75190 326 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 MED26O95402 600 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 JMJD7P0C870 316 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 DRD5P21918 477 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 MAP3K8P41279 467 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 RBM34P42696 430 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 MTNR1AP48039 350 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 PPP5CP53041 499 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 CDH11P55287 796 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 IGLV3-21P80748 117 aaPredicted RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 EFNB1P98172 346 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 PRKCDQ05655 676 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 MGAT2Q10469 447 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 DSG2Q14126 1118 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 EXOSC7Q15024 291 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 DEFB110Q30KQ9 67 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 AMZ1Q400G9 498 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 C14orf28Q4W4Y0 310 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 CCNJQ5T5M9 372 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 FIGNL1Q6PIW4 674 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 OGFOD3Q6PK18 319 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 ZNF620Q6ZNG0 422 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 IGFN1Q86VF2 1251 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 ATCAYQ86WG3 371 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 KIF18BQ86Y91 864 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 GRAMD2AQ8IUY3 354 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 NKAIN4Q8IVV8 208 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 PSD4Q8NDX1 1056 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 TMEM52Q8NDY8 209 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 OR7G1Q8NGA0 311 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 OR52I1Q8NGK6 324 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 BRIX1Q8TDN6 353 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 CHPT1Q8WUD6 406 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 TMEM239Q8WW34 195 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 PIK3R3Q92569 461 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 RPL3LQ92901 407 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 ABTB1Q969K4 478 aaPredicted RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 CEP19Q96LK0 163 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 ZNF285Q96NJ3 590 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 OR5M11Q96RB7 305 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 MAP3K3Q99759 626 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 ALOXE3Q9BYJ1 711 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 SLIRPQ9GZT3 109 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 HOXD1Q9GZZ0 328 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 DSN1Q9H410 356 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 FN3KQ9H479 309 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 EGLN3Q9H6Z9 239 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 EXOSC4Q9NPD3 245 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 CNIH4Q9P003 139 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
USF1-208ENST00000528768 BSNQ9UPA5 3926 aa10.84□□□□□ -0.67
USF1-208ENST00000528768 ISPDA4D126 451 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 J3QRK9 145 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 KLF4O43474 513 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 HCN1O60741 890 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 KCNK2O95069 426 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 CBX7O95931 251 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 IFI30P13284 250 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 CCKBRP32239 447 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 ATP6V1E1P36543 226 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 GPR4P46093 362 aa10.83□□□□□ -0.68
USF1-208ENST00000528768 CAPZA2P47755 286 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms