RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DFFAO00273 331 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CCSO14618 274 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ANKRD28O15084 1053 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SCAMP2O15127 329 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MSH4O15457 936 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PLA2G10O15496 165 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CFLARO15519 480 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR10H3O60404 316 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SC5DO75845 299 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 AQP8O94778 261 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GLCEO94923 617 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PRAMEF12O95522 483 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 NTSR2O95665 410 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 AP2A1O95782 977 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MLYCDO95822 493 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PNPP00491 289 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 HPP00738 406 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SERPINA3P01011 423 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LDLRP01130 860 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PIGRP01833 764 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TRBC1P01850 177 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RPLP0P05388 317 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 INHBAP08476 426 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 HOXB5P09067 269 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CSF3P09919 207 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SBK3P0C264 359 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZSCAN5DPP0CG00 497 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RD3LP0DJH9 198 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FGF3P11487 239 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 UCHL3P15374 230 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 IL7RP16871 459 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PSMB9P28065 219 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 S100A2P29034 98 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LCN1P31025 176 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 HOXC8P31273 242 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SFNP31947 248 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GRK5P34947 590 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CD200P41217 278 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MNDAP41218 407 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MAP2K4P45985 399 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CDX1P47902 265 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 EVX1P49640 407 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 NDUFV1P49821 464 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CLCN3P51790 818 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TDGF1P3P51864 188 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 AGFG1P52594 562 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CTSCP53634 463 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PRKAG1P54619 331 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CLDN8P56748 225 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LSM6P62312 80 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 DYNLL1P63167 89 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GPC5P78333 572 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC35A2P78381 396 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FKBP3Q00688 224 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PIGFQ07326 219 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CD47Q08722 323 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ELP6Q0PNE2 266 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RASGEF1BQ0VAM2 473 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SREBF2Q12772 1141 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PTP4A2Q12974 167 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PDZK1IP1Q13113 114 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MADCAM1Q13477 382 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GPM6BQ13491 265 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PIN1Q13526 163 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LASP1Q14847 261 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SF3A2Q15428 464 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FCN2Q15485 313 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF79Q15937 498 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 KCTD19Q17RG1 926 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PCGF3Q3KNV8 242 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TIMM50Q3ZCQ8 353 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM182AQ5T1J6 154 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LGSNQ5TDP6 509 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PRAMEF20Q5VT98 475 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LEMD1Q68G75 181 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR8G2PQ6IF36 304 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LAIR2Q6ISS4 152 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LRRC8EQ6NSJ5 796 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM45BPQ6NSW5 357 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 AADACL2Q6P093 401 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 C8orf82Q6P1X6 216 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FAHD2BQ6P2I3 314 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SPESP1Q6UW49 350 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TMIGD1Q6UXZ0 262 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TIFABQ6ZNK6 161 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RNF165Q6ZSG1 346 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC29A4Q7RTT9 530 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LRRC28Q86X40 367 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PUSL1Q8N0Z8 303 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZFP82Q8N141 532 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 HDDC3Q8N4P3 179 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 HSD17B11Q8NBQ5 300 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF555Q8NEP9 628 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR52N4Q8NGI2 321 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR52M1Q8NGK5 317 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR5M9Q8NGP3 310 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR13C2Q8NGS9 318 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR4Q3Q8NH05 313 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR1S1Q8NH92 325 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 IL31RAQ8NI17 732 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms